RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PLCD4Q9BRC7 762 aa13.55□□□□□ -0.24
CAPN3-221ENST00000638141 SLMAPQ14BN4 828 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 ALS2CLQ60I27 953 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 C6orf89Q6UWU4 347 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 SIL1Q9H173 461 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 EPN3Q9H201 632 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 EHD4Q9H223 541 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 FLT4P35916 1363 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 IPO7O95373 1038 aaKnown RBP13.54□□□□□ -0.24
CAPN3-221ENST00000638141 MYBL2P10244 700 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 NEFHP12036 1026 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 PRPHP41219 470 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 SYKP43405 635 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 AKAP17AQ02040 695 aaKnown RBP13.54□□□□□ -0.24
CAPN3-221ENST00000638141 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-221ENST00000638141 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
CAPN3-221ENST00000638141 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-221ENST00000638141 HOOK1Q9UJC3 728 aaKnown RBP13.54□□□□□ -0.24
CAPN3-221ENST00000638141 PSMD14O00487 310 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 MPHOSPH10O00566 681 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 PPP6R2O75170 966 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 ATP5JP18859 108 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 FILIP1LQ4L180 1135 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 CLIC4Q9Y696 253 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 MYH8P13535 1937 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 PBX1P40424 430 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 TMTC1Q8IUR5 882 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 CNGA4Q8IV77 575 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
CAPN3-221ENST00000638141 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 NUCKS1Q9H1E3 243 aaKnown RBP13.53□□□□□ -0.24
CAPN3-221ENST00000638141 ITIH6Q6UXX5 1313 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 UBAP1LF5GYI3 381 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 MFAP3LO75121 409 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 GCKP35557 465 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 APBA1Q02410 837 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 PAPD7Q5XG87 772 aaKnown RBP13.52□□□□□ -0.24
CAPN3-221ENST00000638141 ANO1Q5XXA6 986 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.24
CAPN3-221ENST00000638141 MLKLQ8NB16 471 aa13.52□□□□□ -0.24
CAPN3-221ENST00000638141 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.25
CAPN3-221ENST00000638141 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 PPFIBP1Q86W92 1011 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 P3H4Q92791 437 aa13.52□□□□□ -0.25
CAPN3-221ENST00000638141 FOXO3O43524 673 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 PECAM1P16284 738 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-221ENST00000638141 ITIH3Q06033 890 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
CAPN3-221ENST00000638141 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 TRIML1Q8N9V2 468 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 ZNF473Q8WTR7 871 aaKnown RBP13.51□□□□□ -0.25
CAPN3-221ENST00000638141 SAAL1Q96ER3 474 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 BORCS6Q96GS4 357 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
CAPN3-221ENST00000638141 SLAIN2Q9P270 581 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 UTYO14607 1347 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 CYP21A2P08686 494 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 LSP1P33241 339 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 DCCP43146 1447 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 PSMD1Q99460 953 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
CAPN3-221ENST00000638141 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
CAPN3-221ENST00000638141 MST1RQ04912 1400 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 XRCC4Q13426 336 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 NAA25Q14CX7 972 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 EAF2Q96CJ1 260 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 PHAXQ9H814 394 aaKnown RBP13.5□□□□□ -0.25
CAPN3-221ENST00000638141 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 A0A0U1RQJ8 604 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 MGRN1O60291 552 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 TOM1O60784 492 aa13.5□□□□□ -0.25
CAPN3-221ENST00000638141 FAM107AO95990 144 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms