RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 GPAA1O43292 621 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 GH2P01242 217 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 CYP2D6P10635 497 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 NUCB1Q02818 461 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 RAB3GAP1Q15042 981 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 PARK7Q99497 189 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 FEZ1Q99689 392 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 M0R2C6 588 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 TDO2P48775 406 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 HMGCS2P54868 508 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 SP3Q02447 781 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 ABCB5Q2M3G0 1257 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 CD99L2Q8TCZ2 262 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 ERO1AQ96HE7 468 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
CACNA1A-249ENST00000637777 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 USP17L12C9JPN9 530 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 USP17L21D6R901 530 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 MTMR2Q13614 643 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 KIF22Q14807 665 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 SHROOM1Q2M3G4 852 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 METTL16Q86W50 562 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 GINM1Q9NU53 330 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 TRIM17Q9Y577 477 aa17.27■□□□□ 0.36
CACNA1A-249ENST00000637777 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 GNAT2P19087 354 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 EVX2Q03828 476 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 STK11IPQ8N1F8 1099 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 ABHD8Q96I13 439 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 SWAP70Q9UH65 585 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 CPA4Q9UI42 421 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 PNMA3Q9UL41 463 aa17.26■□□□□ 0.35
CACNA1A-249ENST00000637777 CCDC85CA6NKD9 419 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 TLR2O60603 784 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 CYP2C8P10632 490 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 SHMT1P34896 483 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 ARHGEF6Q15052 776 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 TATDN1Q6P1N9 297 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
CACNA1A-249ENST00000637777 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 JAG1P78504 1218 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 MOGSQ13724 837 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 GPAT2Q6NUI2 795 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 PROCA1Q8NCQ7 364 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 EFCC1Q9HA90 598 aa17.24■□□□□ 0.35
CACNA1A-249ENST00000637777 LOC285556D6RIA3 1793 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 OSBPP22059 807 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 BACE1P56817 501 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 TREML2Q5T2D2 321 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 CCDC129Q6ZRS4 1044 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 WDR18Q9BV38 432 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 NAPBQ9H115 298 aa17.23■□□□□ 0.35
CACNA1A-249ENST00000637777 GSG1L2A8MUP6 293 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 C19orf81C9J6K1 198 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 CDK8P49336 464 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 GABPAQ06546 454 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
CACNA1A-249ENST00000637777 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 NEFLP07196 543 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 SEPT2Q15019 361 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 USP17L2Q6R6M4 530 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 OTOP1Q7RTM1 612 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
CACNA1A-249ENST00000637777 RAD21O60216 631 aa17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 FMNL1O95466 1100 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 USP14P54578 494 aa17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 TMEM179Q6ZVK1 233 aa17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
CACNA1A-249ENST00000637777 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms