RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 BACE1P56817 501 aa15.34■□□□□ 0.05
CTSD-208ENST00000636843 MAPKAPK5Q8IW41 473 aa15.34■□□□□ 0.05
CTSD-208ENST00000636843 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
CTSD-208ENST00000636843 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
CTSD-208ENST00000636843 TMOD4Q9NZQ9 345 aa15.34■□□□□ 0.05
CTSD-208ENST00000636843 FLT1P17948 1338 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 C19orf81C9J6K1 198 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.05
CTSD-208ENST00000636843 IRX3P78415 501 aaPredicted RBP15.33■□□□□ 0.05
CTSD-208ENST00000636843 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 ADGRA1Q86SQ6 560 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 CERS3Q8IU89 383 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 DEFB118Q96PH6 123 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 MORF4L1Q9UBU8 362 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.05
CTSD-208ENST00000636843 TRIOBPQ9H2D6 2365 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 LOC285556D6RIA3 1793 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
CTSD-208ENST00000636843 PDE4AP27815 886 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 MTMR2Q13614 643 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 C1orf115Q9H7X2 142 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 DNAJC18Q9H819 358 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 PIH1D3Q9NQM4 214 aaKnown RBP15.33■□□□□ 0.04
CTSD-208ENST00000636843 DBNLQ9UJU6 430 aaKnown RBP15.33■□□□□ 0.04
CTSD-208ENST00000636843 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 PALD1Q9ULE6 856 aa15.33■□□□□ 0.04
CTSD-208ENST00000636843 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
CTSD-208ENST00000636843 HMGCRP04035 888 aa15.32■□□□□ 0.04
CTSD-208ENST00000636843 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
CTSD-208ENST00000636843 CYP7A1P22680 504 aa15.32■□□□□ 0.04
CTSD-208ENST00000636843 BACH2Q9BYV9 841 aa15.32■□□□□ 0.04
CTSD-208ENST00000636843 USP17L10C9JJH3 530 aa15.31■□□□□ 0.04
CTSD-208ENST00000636843 IGHDP01880 384 aa15.31■□□□□ 0.04
CTSD-208ENST00000636843 JAG1P78504 1218 aa15.31■□□□□ 0.04
CTSD-208ENST00000636843 TMED8Q6PL24 325 aaPredicted RBP15.31■□□□□ 0.04
CTSD-208ENST00000636843 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
CTSD-208ENST00000636843 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.31■□□□□ 0.043e-9■■■■■ 28.2
CTSD-208ENST00000636843 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
CTSD-208ENST00000636843 RBM27Q9P2N5 1060 aaKnown RBP15.31■□□□□ 0.04
CTSD-208ENST00000636843 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
CTSD-208ENST00000636843 EVI5O60447 810 aa15.3■□□□□ 0.04
CTSD-208ENST00000636843 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 DYNLL1P63167 89 aaKnown RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
CTSD-208ENST00000636843 GTF3C2Q8WUA4 911 aaPredicted RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 TLR7Q9NYK1 1049 aaKnown RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
CTSD-208ENST00000636843 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
CTSD-208ENST00000636843 ATAD5Q96QE3 1844 aa15.3■□□□□ 0.04
CTSD-208ENST00000636843 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 GDF11O95390 407 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 HERVK_113P62684 666 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
CTSD-208ENST00000636843 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
CTSD-208ENST00000636843 USP5P45974 858 aa15.28■□□□□ 0.04
CTSD-208ENST00000636843 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
CTSD-208ENST00000636843 USP17L2Q6R6M4 530 aa15.28■□□□□ 0.04
CTSD-208ENST00000636843 SOCS4Q8WXH5 440 aa15.28■□□□□ 0.04
CTSD-208ENST00000636843 PAWRQ96IZ0 340 aaKnown RBP15.28■□□□□ 0.04
CTSD-208ENST00000636843 XRCC5P13010 732 aaKnown RBP15.27■□□□□ 0.04
CTSD-208ENST00000636843 MAPK4P31152 587 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 ANP32AP39687 249 aaKnown RBP15.27■□□□□ 0.04
CTSD-208ENST00000636843 SHROOM1Q2M3G4 852 aaPredicted RBP15.27■□□□□ 0.04
CTSD-208ENST00000636843 TATDN1Q6P1N9 297 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.04
CTSD-208ENST00000636843 MAGEB6Q8N7X4 407 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 EHD4Q9H223 541 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 TXNRD2Q9NNW7 524 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 EMILIN3Q9NT22 766 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 RBPJLQ9UBG7 517 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.04
CTSD-208ENST00000636843 A0A1W2PPC1 479 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 GH2P01242 217 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 TTC6Q86TZ1 520 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.03
CTSD-208ENST00000636843 MIGA1Q8NAN2 632 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 SERPINB13Q9UIV8 391 aa15.27■□□□□ 0.03
CTSD-208ENST00000636843 CYP2B6P20813 491 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 ERVK-9P63128 1117 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 ERVK-24P63145 666 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 TRIM32Q13049 653 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 AACSQ86V21 672 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 TRIB2Q92519 343 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 C12orf42Q96LP6 360 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 FOCADQ5VW36 1801 aa15.26■□□□□ 0.03
CTSD-208ENST00000636843 USP14P54578 494 aa15.25■□□□□ 0.03
CTSD-208ENST00000636843 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
CTSD-208ENST00000636843 DIS3LQ8TF46 1054 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms