RNA–Protein interactions for RNA: ENST00000636629.1

CACNA1D-215, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2

Gene CACNA1D, Length 1,749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-215ENST00000636629 LAMB1P07942 1786 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 KLF18A0A0U1RQI7 1052 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 SHMT1P34896 483 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 NFXL1Q6ZNB6 911 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 MYL10Q9BUA6 226 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 ANGEL1Q9UNK9 670 aaKnown RBP16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 TNKSO95271 1327 aa16.71■□□□□ 0.27
CACNA1D-215ENST00000636629 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 GLTPD2A6NH11 291 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 RXRAP19793 462 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ENAHQ8N8S7 591 aaPredicted RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 IL17RBQ9NRM6 502 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 GGA3Q9NZ52 723 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 MYH1P12882 1939 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 AKR1B1P15121 316 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 CUL4AQ13619 759 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 WTAPQ15007 396 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 SEC23AQ15436 765 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 EHD4Q9H223 541 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
CACNA1D-215ENST00000636629 ERICH2A1L162 156 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 SART3Q15020 963 aaKnown RBP16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 CLEC10AQ8IUN9 316 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 FBXL16Q8N461 479 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 SWAP70Q9UH65 585 aa16.69■□□□□ 0.26
CACNA1D-215ENST00000636629 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 GOLGA8BA8MQT2 603 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 PPFIA3O75145 1194 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 TNNI2P48788 182 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 RRP1BQ14684 758 aaKnown RBP16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 SH2B1Q9NRF2 756 aaPredicted RBP16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
CACNA1D-215ENST00000636629 SCRN1Q12765 414 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 POTECB2RU33 542 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 PFKFB2O60825 505 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 GDF11O95390 407 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 EPHX2P34913 555 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 LIFRP42702 1097 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 EVCP57679 992 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 JAG1P78504 1218 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 RCSD1Q6JBY9 416 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 MICU3Q86XE3 530 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 ZNF274Q96GC6 653 aaPredicted RBP16.67■□□□□ 0.26
CACNA1D-215ENST00000636629 COL2A1P02458 1487 aaPredicted RBP16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 SGMS1Q86VZ5 419 aa16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 METTL16Q86W50 562 aaKnown RBP16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
CACNA1D-215ENST00000636629 SIPA1L1O43166 1804 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 TATDN1Q6P1N9 297 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 FZD1Q9UP38 647 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 ZBTB43O43298 467 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 APOBEC3FQ8IUX4 373 aaKnown RBP16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 ZNF654Q8IZM8 581 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 TCP11L1Q9NUJ3 509 aa16.65■□□□□ 0.26
CACNA1D-215ENST00000636629 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
CACNA1D-215ENST00000636629 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
CACNA1D-215ENST00000636629 ADM5C9JUS6 153 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms