RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
CACNA1A-228ENST00000636610 KIF2AO00139 706 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 LIFRP42702 1097 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 CHRNDQ07001 517 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 KRT23Q9C075 422 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 FGFR2P21802 821 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 PTPREP23469 700 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 PLIN2Q99541 437 aa16.03■□□□□ 0.16
CACNA1A-228ENST00000636610 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 EXOC5O00471 708 aa16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 CCDC93Q567U6 631 aa16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 PUF60Q9UHX1 559 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-228ENST00000636610 CASQ1P31415 396 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 TMEM139Q8IV31 216 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 CCDC12Q8WUD4 166 aaPredicted RBP16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 MRPL44Q9H9J2 332 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 AKAP11Q9UKA4 1901 aa16.02■□□□□ 0.15
CACNA1A-228ENST00000636610 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 DEXIO95424 95 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 GYS2P54840 703 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 TERF2Q15554 542 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 RILPL1Q5EBL4 403 aa16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 HOOK1Q9UJC3 728 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-228ENST00000636610 ABCC12Q96J65 1359 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ABL1P00519 1130 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 SLC51AQ86UW1 340 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 GPIHBP1Q8IV16 184 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ENAHQ8N8S7 591 aaPredicted RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 WASF1Q92558 559 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 MAGEB6P1A0A0J9YX57 407 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 TRIM75PA6NK02 468 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ARHGAP6O43182 974 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ACTN4O43707 911 aaKnown RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 PNMA6AP0CW24 399 aaPredicted RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 KLRK1P26718 216 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 MCM7P33993 719 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 RBL2Q08999 1139 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 TNS2Q63HR2 1409 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 ZSCAN12O43309 604 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
CACNA1A-228ENST00000636610 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 ZNF34Q8IZ26 560 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 RASGRP4Q8TDF6 673 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 VPS16Q9H269 839 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
CACNA1A-228ENST00000636610 LAMB4A4D0S4 1761 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 USP17L21D6R901 530 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 ZBTB22O15209 634 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 CYP2D6P10635 497 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 H2AFXP16104 143 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 MORC3Q14149 939 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 IGSF22Q8N9C0 903 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 SRCAPQ6ZRS2 3230 aa15.99■□□□□ 0.15
CACNA1A-228ENST00000636610 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 AATFQ9NY61 560 aaKnown RBP eCLIP15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 SRPRBQ9Y5M8 271 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 DPYDQ12882 1025 aa15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 ESR2Q92731 530 aa15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-228ENST00000636610 CASP14P31944 242 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PTGDRQ13258 359 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 BMS1Q14692 1282 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 ALX1Q15699 326 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 PKN1Q16512 942 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 CCDC152Q4G0S7 254 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 RAD9BQ6WBX8 426 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 TICAM2Q86XR7 235 aa15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-228ENST00000636610 NOL10Q9BSC4 688 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms