RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MTMR2Q13614 643 aa21.73■■□□□ 1.07
PNKP-225ENST00000636214 RRP1BQ14684 758 aaKnown RBP21.73■■□□□ 1.07
PNKP-225ENST00000636214 SIRT2Q8IXJ6 389 aa21.73■■□□□ 1.07
PNKP-225ENST00000636214 ANKRD13CQ8N6S4 541 aa21.73■■□□□ 1.07
PNKP-225ENST00000636214 WDR18Q9BV38 432 aa21.73■■□□□ 1.07
PNKP-225ENST00000636214 PDE6AP16499 860 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 BACE1P56817 501 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 FAM110CQ1W6H9 321 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 METTL16Q86W50 562 aaKnown RBP21.72■■□□□ 1.07
PNKP-225ENST00000636214 COA7Q96BR5 231 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 CRNKL1Q9BZJ0 848 aaKnown RBP21.72■■□□□ 1.07
PNKP-225ENST00000636214 DNAJC18Q9H819 358 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
PNKP-225ENST00000636214 C19orf81C9J6K1 198 aa21.71■■□□□ 1.07
PNKP-225ENST00000636214 USP17L10C9JJH3 530 aa21.71■■□□□ 1.07
PNKP-225ENST00000636214 POLR3DP05423 398 aaPredicted RBP21.71■■□□□ 1.07
PNKP-225ENST00000636214 SH3D19Q5HYK7 790 aa21.71■■□□□ 1.07
PNKP-225ENST00000636214 SLAIN1Q8ND83 568 aa21.71■■□□□ 1.07
PNKP-225ENST00000636214 C20orf194Q5TEA3 1177 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 NKX2-3Q8TAU0 364 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 FEZ1Q99689 392 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 LRRCC1Q9C099 1032 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.7■■□□□ 1.063e-7■■■■■ 36.7
PNKP-225ENST00000636214 ASCC2Q9H1I8 757 aaPredicted RBP21.7■■□□□ 1.06
PNKP-225ENST00000636214 EHD4Q9H223 541 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 PAG1Q9NWQ8 432 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
PNKP-225ENST00000636214 CABP5Q9NP86 173 aa21.69■■□□□ 1.06
PNKP-225ENST00000636214 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
PNKP-225ENST00000636214 NAV1Q8NEY1 1877 aa21.69■■□□□ 1.06
PNKP-225ENST00000636214 GH2P01242 217 aa21.68■■□□□ 1.06
PNKP-225ENST00000636214 RIOK1Q9BRS2 568 aaKnown RBP21.68■■□□□ 1.06
PNKP-225ENST00000636214 BOLA2Q9H3K6 86 aa21.68■■□□□ 1.06
PNKP-225ENST00000636214 MKI67P46013 3256 aaKnown RBP21.68■■□□□ 1.06
PNKP-225ENST00000636214 BRCA2P51587 3418 aa21.68■■□□□ 1.06
PNKP-225ENST00000636214 ADCY3O60266 1144 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 FLT3LGP49771 235 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 CERKLQ49MI3 558 aaPredicted RBP21.67■■□□□ 1.06
PNKP-225ENST00000636214 USP17L2Q6R6M4 530 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 RNF208Q9H0X6 261 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 MCM9Q9NXL9 1143 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 GABRQQ9UN88 632 aa21.67■■□□□ 1.06
PNKP-225ENST00000636214 ATP5JP18859 108 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 MTFR1Q15390 333 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 ABCB5Q2M3G0 1257 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 GTF3C2Q8WUA4 911 aaPredicted RBP21.66■■□□□ 1.06
PNKP-225ENST00000636214 GPATCH3Q96I76 525 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 DOCK3Q8IZD9 2030 aa21.66■■□□□ 1.06
PNKP-225ENST00000636214 CCL5P13501 91 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 HOXA7P31268 230 aaPredicted RBP21.65■■□□□ 1.06
PNKP-225ENST00000636214 USP14P54578 494 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 TATDN1Q6P1N9 297 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 CCAR1Q8IX12 1150 aaKnown RBP21.65■■□□□ 1.06
PNKP-225ENST00000636214 AMOTL1Q8IY63 956 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 PXYLP1Q8TE99 480 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 DDRGK1Q96HY6 314 aa21.65■■□□□ 1.06
PNKP-225ENST00000636214 JAG1P78504 1218 aa21.64■■□□□ 1.05
PNKP-225ENST00000636214 IRF5Q13568 498 aa21.64■■□□□ 1.05
PNKP-225ENST00000636214 SHROOM1Q2M3G4 852 aaPredicted RBP21.64■■□□□ 1.05
PNKP-225ENST00000636214 ZSCAN25Q6NSZ9 544 aa21.64■■□□□ 1.05
PNKP-225ENST00000636214 GCC1Q96CN9 775 aa21.64■■□□□ 1.05
PNKP-225ENST00000636214 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
PNKP-225ENST00000636214 HAUS7Q99871 368 aa21.64■■□□□ 1.05
PNKP-225ENST00000636214 HERVK_113P62684 666 aa21.63■■□□□ 1.05
PNKP-225ENST00000636214 ZYXQ15942 572 aaKnown RBP21.63■■□□□ 1.05
PNKP-225ENST00000636214 LCORLQ8N3X6 602 aa21.63■■□□□ 1.05
PNKP-225ENST00000636214 CWC22Q9HCG8 908 aaKnown RBP21.63■■□□□ 1.05
PNKP-225ENST00000636214 MYH7P12883 1935 aa21.63■■□□□ 1.05
PNKP-225ENST00000636214 MPHOSPH10O00566 681 aaKnown RBP21.62■■□□□ 1.05
PNKP-225ENST00000636214 INHAP05111 366 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 GJB1P08034 283 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 ELNP15502 786 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 ADD2P35612 726 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 PLCD1P51178 756 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 GPRC5AQ8NFJ5 357 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 P2RX7Q99572 595 aaKnown RBP21.62■■□□□ 1.05
PNKP-225ENST00000636214 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
PNKP-225ENST00000636214 CEP290O15078 2479 aa21.61■■□□□ 1.05
PNKP-225ENST00000636214 TCRBV5S4A2TA0A5A2 114 aa21.61■■□□□ 1.05
PNKP-225ENST00000636214 SMARCA5O60264 1052 aaPredicted RBP21.61■■□□□ 1.05
PNKP-225ENST00000636214 MBD4O95243 580 aa21.61■■□□□ 1.05
PNKP-225ENST00000636214 DCP1AQ9NPI6 582 aaPredicted RBP21.61■■□□□ 1.05
PNKP-225ENST00000636214 MORF4L1Q9UBU8 362 aa21.61■■□□□ 1.05
PNKP-225ENST00000636214 DDX60LQ5H9U9 1706 aaKnown RBP21.6■■□□□ 1.05
PNKP-225ENST00000636214 SHMT1P34896 483 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 GJA8P48165 433 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 PAGR1Q9BTK6 254 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 UNC93B1Q9H1C4 597 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 EMILIN3Q9NT22 766 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 ATP8A2Q9NTI2 1148 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 ECHDC1Q9NTX5 307 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 MYH8P13535 1937 aa21.6■■□□□ 1.05
PNKP-225ENST00000636214 USP17L15C9J2P7 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L13C9JLJ4 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L11C9JVI0 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L18D6R9N7 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L22D6RA61 530 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms