RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TADA2BQ86TJ2 420 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TUBB2AQ13885 445 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 FLOT2Q14254 428 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 ZC3H12BQ5HYM0 836 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 KRT79Q5XKE5 535 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 HAUS3Q68CZ6 603 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 FGD4Q96M96 766 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TUBB2BQ9BVA1 445 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 DMRT2Q9Y5R5 561 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 EIF3CLB5ME19 914 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TCF3P15923 654 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 MAN1A1P33908 653 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 AHI1Q8N157 1196 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 VPS37AQ8NEZ2 397 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 RSAD2Q8WXG1 361 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TRIM63Q969Q1 353 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 HDAC11Q96DB2 347 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 KRT12Q99456 494 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 EIF3CQ99613 913 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TRMT112Q9UI30 125 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 TPX2Q9ULW0 747 aaKnown RBP6.63□□□□□ -1.35
SCN1A-212ENST00000636194 CAPN9O14815 690 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 GNAT2P19087 354 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 GARSP41250 739 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 KPNA2P52292 529 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 SELENONQ9NZV5 590 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ASXL3Q9C0F0 2248 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 BRD1O95696 1058 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MARCKSP29966 332 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 NBPF5PQ86XG9 351 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 NDUFAF2Q8N183 169 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 PANK1Q8TE04 598 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ANKRD30BQ9BXX2 1392 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MTMR3Q13615 1198 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 KRT81Q14533 505 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 EXOC6Q8TAG9 804 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 KIF2CQ99661 725 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 PAIP2BQ9ULR5 123 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MEIS1O00470 390 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ARHGAP44Q17R89 818 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 VSIG1Q86XK7 387 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 SPATS2Q86XZ4 545 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 NGLY1Q96IV0 654 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 RMDN2Q96LZ7 410 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 TRIM15Q9C019 465 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 NDEL1Q9GZM8 345 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 DONSONQ9NYP3 566 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ABCC8Q09428 1581 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 CASP2P42575 452 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 KAZNQ674X7 775 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ANKLE2Q86XL3 938 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.353e-8■□□□□ 9.3
SCN1A-212ENST00000636194 TTI1O43156 1089 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 PRPF6O94906 941 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 TBC1D8O95759 1140 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ST13P50502 369 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 UBXN1Q04323 297 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 ZBTB33Q86T24 672 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 CHD1LQ86WJ1 897 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MAP7D3Q8IWC1 876 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 SCG3Q8WXD2 468 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MRPS26Q9BYN8 205 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 GSTA4O15217 222 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 MED21Q13503 144 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 GLE1Q53GS7 698 aaKnown RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 DCAF17Q5H9S7 520 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-212ENST00000636194 KLHDC4Q8TBB5 520 aa6.62□□□□□ -1.35
SCN1A-212ENST00000636194 RASSF10A6NK89 507 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 NUP62P37198 522 aaPredicted RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 TRIM14Q14142 442 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 FBXL13Q8NEE6 735 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 PPWD1Q96BP3 646 aaKnown RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 SLC38A10Q9HBR0 1119 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 TRMT1Q9NXH9 659 aaKnown RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 SLC12A6Q9UHW9 1150 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 ESRRBO95718 433 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 TNNC2P02585 160 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 UBE2HP62256 183 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 MICU3Q86XE3 530 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 UBN1Q9NPG3 1134 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 STK25O00506 426 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 TBC1D12O60347 775 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 SLC9A1P19634 815 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 RINT1Q6NUQ1 792 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 LUZP2Q86TE4 346 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 SPATA17Q96L03 361 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 SRPK1Q96SB4 655 aaKnown RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 KIF9Q9HAQ2 790 aa6.61□□□□□ -1.35
SCN1A-212ENST00000636194 NOB1Q9ULX3 412 aaKnown RBP6.61□□□□□ -1.35
SCN1A-212ENST00000636194 DIDO1Q9BTC0 2240 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms