RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 NUP58Q9BVL2 599 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 DNAJC8O75937 253 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PDCD2Q16342 344 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 NCAPH2Q6IBW4 605 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 JADE1Q6IE81 842 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 RAB44Q7Z6P3 723 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 DEPTORQ8TB45 409 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SSH1Q8WYL5 1049 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 KRT12Q99456 494 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CPSF3Q9UKF6 684 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SLFN5Q08AF3 891 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 IQCB1Q15051 598 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 DCAF15Q66K64 600 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 KIAA1841Q6NSI8 718 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 IFT20Q8IY31 132 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 GANCQ8TET4 914 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 JARID2Q92833 1246 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 UBN1Q9NPG3 1134 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 EIF4G3O43432 1585 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 XPOTO43592 962 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SMIM24O75264 130 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 STAM2O75886 525 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 IFRD2Q12894 506 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 BSPRYQ5W0U4 402 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CHST3Q7LGC8 479 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 HDXQ7Z353 690 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PDZD8Q8NEN9 1154 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 MMS19Q96T76 1030 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CDCA7Q9BWT1 371 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TSPYL2Q9H2G4 693 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PRDM10Q9NQV6 1147 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 MRC2Q9UBG0 1479 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 ARHGEF37A1IGU5 675 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 VWA3AA6NCI4 1184 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SRGAP2BP0DMP2 458 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TTC31Q49AM3 519 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 RINT1Q6NUQ1 792 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 METTL23Q86XA0 190 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CPXCR1Q8N123 301 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PLIN2Q99541 437 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CHPF2Q9P2E5 772 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CTNND2Q9UQB3 1225 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 AK9Q5TCS8 1911 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SBNO2Q9Y2G9 1366 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 GARSP41250 739 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SLC1A4P43007 532 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 BAG6P46379 1132 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PDE4DQ08499 809 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PDCD7Q8N8D1 485 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 LRRC59Q96AG4 307 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 VPS18Q9P253 973 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 C11orf95C9JLR9 678 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 KRT15P19012 456 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 HADHQ16836 314 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 USH1GQ495M9 461 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 COPS6Q7L5N1 327 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 N4BP2L2Q92802 583 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 HDAC11Q96DB2 347 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 NSD2O96028 1365 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 H0YCG3 227 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 CCDC93Q567U6 631 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 SULF1Q8IWU6 871 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 BAG1Q99933 345 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TEKT2Q9UIF3 430 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 AKR1B15C9JRZ8 316 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 RNF113AO15541 343 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 NOP14P78316 857 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 RNASELQ05823 741 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 DLGAP5Q15398 846 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 CALCRLQ16602 461 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 LRRC2Q9BYS8 371 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 AP5M1Q9H0R1 490 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ST7Q9NRC1 585 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 FAM95CA0A1B0GW59 222 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 PHEXP78562 749 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TBCCQ15814 346 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 MMEL1Q495T6 779 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 SLC9C1Q4G0N8 1177 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ANKRD20A3Q5VUR7 823 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 GIMAP6Q6P9H5 292 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 BANK1Q8NDB2 785 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 PAGR1Q9BTK6 254 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 Q9H521 79 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 RBM8AQ9Y5S9 174 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 IFT140Q96RY7 1462 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TLR3O15455 904 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ATXN8OSP0DMR3 200 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TAF11Q15544 211 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 DENND2CQ68D51 928 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 RUFY4Q6ZNE9 571 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TTC30AQ86WT1 665 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ATP6V0A1Q93050 837 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 EIF2AQ9BY44 585 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 PPP1R12CQ9BZL4 782 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 LZTFL1Q9NQ48 299 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms