RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 SLC45A1Q9Y2W3 748 aa18.86■□□□□ 0.61
LINC00339-209ENST00000635450 USP17L5A8MUK1 530 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 GOLIM4O00461 696 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 CHGBP05060 677 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 PDE6AP16499 860 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 HDAC1Q13547 482 aaPredicted RBP18.85■□□□□ 0.61
LINC00339-209ENST00000635450 MTMR2Q13614 643 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
LINC00339-209ENST00000635450 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
LINC00339-209ENST00000635450 PEX10O60683 326 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 GNRH1P01148 92 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 CERS3Q8IU89 383 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 CRACR2BQ8N4Y2 399 aaPredicted RBP18.84■□□□□ 0.61
LINC00339-209ENST00000635450 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 PROCA1Q8NCQ7 364 aaPredicted RBP18.84■□□□□ 0.61
LINC00339-209ENST00000635450 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
LINC00339-209ENST00000635450 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 PAG1Q9NWQ8 432 aa18.84■□□□□ 0.61
LINC00339-209ENST00000635450 CEP290O15078 2479 aa18.83■□□□□ 0.61
LINC00339-209ENST00000635450 USP5P45974 858 aa18.83■□□□□ 0.6
LINC00339-209ENST00000635450 FCGRTP55899 365 aa18.83■□□□□ 0.6
LINC00339-209ENST00000635450 PRPF38BQ5VTL8 546 aaKnown RBP18.83■□□□□ 0.6
LINC00339-209ENST00000635450 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
LINC00339-209ENST00000635450 HAUS7Q99871 368 aa18.83■□□□□ 0.6
LINC00339-209ENST00000635450 ZNF532Q9HCE3 1301 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 TCRBV5S4A2TA0A5A2 114 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 SH3D19Q5HYK7 790 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 NBPF11Q86T75 865 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 RAET1EQ8TD07 263 aa18.82■□□□□ 0.6
LINC00339-209ENST00000635450 ASCC2Q9H1I8 757 aaPredicted RBP18.82■□□□□ 0.6
LINC00339-209ENST00000635450 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 ASNSP08243 561 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 ELNP15502 786 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 GRK4P32298 578 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 PLCD1P51178 756 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 PRMT2P55345 433 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 SLC9C2Q5TAH2 1124 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 FOXP4Q8IVH2 680 aaPredicted RBP18.81■□□□□ 0.6
LINC00339-209ENST00000635450 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 WDR18Q9BV38 432 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 TMEM106CQ9BVX2 250 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
LINC00339-209ENST00000635450 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00339-209ENST00000635450 MAGEB6P1A0A0J9YX57 407 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 GH2P01242 217 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 BACE1P56817 501 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
LINC00339-209ENST00000635450 FAM110CQ1W6H9 321 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 SDR42E1Q8WUS8 393 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
LINC00339-209ENST00000635450 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 TNPO2O14787 897 aaKnown RBP18.79■□□□□ 0.6
LINC00339-209ENST00000635450 ERC2O15083 957 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 CYP2D6P10635 497 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 SHMT1P34896 483 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 FLT3LGP49771 235 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
LINC00339-209ENST00000635450 HOXD10P28358 340 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 TATDN1Q6P1N9 297 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 EHD4Q9H223 541 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
LINC00339-209ENST00000635450 PARP14Q460N5 1801 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 RLFQ13129 1914 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 ALPK3Q96L96 1907 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 CCL5P13501 91 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
LINC00339-209ENST00000635450 TSHZ3Q63HK5 1081 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 SLC44A5Q8NCS7 719 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 TXNRD2Q9NNW7 524 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
LINC00339-209ENST00000635450 USP17L10C9JJH3 530 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 PRKAB2O43741 272 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 ADCY3O60266 1144 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 GLRX3O76003 335 aaKnown RBP18.76■□□□□ 0.59
LINC00339-209ENST00000635450 MBD4O95243 580 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 MX1P20591 662 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 GUCY1A2P33402 732 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 ADD2P35612 726 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 GABPAQ06546 454 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 ACER1Q8TDN7 264 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
LINC00339-209ENST00000635450 UNC93B1Q9H1C4 597 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 DCP1AQ9NPI6 582 aaPredicted RBP18.76■□□□□ 0.59
LINC00339-209ENST00000635450 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
LINC00339-209ENST00000635450 A0A0G2JMZ2 1700 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 SLC34A2O95436 690 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 INHAP05111 366 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 IRX3P78415 501 aaPredicted RBP18.75■□□□□ 0.59
LINC00339-209ENST00000635450 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 SMC5Q8IY18 1101 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 SLAIN1Q8ND83 568 aa18.75■□□□□ 0.59
LINC00339-209ENST00000635450 CRNKL1Q9BZJ0 848 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms