RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 GJD2Q9UKL4 321 aa18.98■□□□□ 0.63
SNRNP48-203ENST00000634363 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
SNRNP48-203ENST00000634363 MYO5AQ9Y4I1 1855 aaKnown RBP18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 PEX10O60683 326 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 HMGCRP04035 888 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 CAPN2P17655 700 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 BACE1P56817 501 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 TNNI3KQ59H18 835 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 P2RX7Q99572 595 aaKnown RBP18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 SAP30BPQ9UHR5 308 aaKnown RBP18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 FPGT-TNNI3KV9GXZ4 949 aa18.97■□□□□ 0.63
SNRNP48-203ENST00000634363 GDF11O95390 407 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 CYP2E1P05181 493 aaPredicted RBP18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 ASNSP08243 561 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 CYP2B6P20813 491 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 JAG1P78504 1218 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 SHROOM1Q2M3G4 852 aaPredicted RBP18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 WDR18Q9BV38 432 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 PRO3102Q9H379 93 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 RPTORQ8N122 1335 aa18.96■□□□□ 0.63
SNRNP48-203ENST00000634363 CDK5RAP2Q96SN8 1893 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 ZAP70P43403 619 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 PPP4CP60510 307 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 ADGRA1Q86SQ6 560 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 CCAR1Q8IX12 1150 aaKnown RBP18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 FLT1P17948 1338 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
SNRNP48-203ENST00000634363 ALPK3Q96L96 1907 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 C19orf81C9J6K1 198 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 USP17L10C9JJH3 530 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 DYNLL1P63167 89 aaKnown RBP18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 C7orf61Q8IZ16 206 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 GPRC5AQ8NFJ5 357 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 GPR108Q9NPR9 543 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 MORF4L1Q9UBU8 362 aa18.94■□□□□ 0.62
SNRNP48-203ENST00000634363 PLXNB2O15031 1838 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 CYP7A1P22680 504 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 HOXA7P31268 230 aaPredicted RBP18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 HERVK_113P62684 666 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 TRIB2Q92519 343 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 NUDT12Q9BQG2 462 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 NBPF3Q9H094 633 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 DNAJC18Q9H819 358 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 TXNRD2Q9NNW7 524 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 PIH1D3Q9NQM4 214 aaKnown RBP18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
SNRNP48-203ENST00000634363 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
SNRNP48-203ENST00000634363 SIRT2Q8IXJ6 389 aa18.92■□□□□ 0.62
SNRNP48-203ENST00000634363 ANKLE1Q8NAG6 615 aa18.92■□□□□ 0.62
SNRNP48-203ENST00000634363 PAGR1Q9BTK6 254 aa18.92■□□□□ 0.62
SNRNP48-203ENST00000634363 ZMYND8Q9ULU4 1186 aaPredicted RBP18.92■□□□□ 0.62
SNRNP48-203ENST00000634363 MAST2Q6P0Q8 1798 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 FOCADQ5VW36 1801 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 IDH1O75874 414 aaKnown RBP18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 Q3C1V9 767 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 MIGA1Q8NAN2 632 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 LRCH3Q96II8 777 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 CWC22Q9HCG8 908 aaKnown RBP18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 RBPJLQ9UBG7 517 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 ZBTB21Q9ULJ3 1066 aa18.91■□□□□ 0.62
SNRNP48-203ENST00000634363 MYH1P12882 1939 aa18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 SOX1O00570 391 aaPredicted RBP18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 SYN1P17600 705 aa18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 USP5P45974 858 aa18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 METTL16Q86W50 562 aaKnown RBP18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 C11orf49Q9H6J7 331 aa18.9■□□□□ 0.62
SNRNP48-203ENST00000634363 A0A1W2PPC1 479 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 GH2P01242 217 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 PRKAR2AP13861 404 aaKnown RBP18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 MAPK4P31152 587 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 ERVK-9P63128 1117 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 ERVK-24P63145 666 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L2Q6R6M4 530 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 ZNF512BQ96KM6 892 aaPredicted RBP18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 EMILIN3Q9NT22 766 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 DBNLQ9UJU6 430 aaKnown RBP18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.61
SNRNP48-203ENST00000634363 DDX60LQ5H9U9 1706 aaKnown RBP18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 APBB1O00213 710 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 AAMPQ13685 434 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 MAGEB6Q8N7X4 407 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 FEZ1Q99689 392 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 PORCNQ9H237 461 aa18.88■□□□□ 0.61
SNRNP48-203ENST00000634363 RAB11FIP3O75154 756 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 XRCC5P13010 732 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms