RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 OTUD5Q96G74 571 aa23.14■■□□□ 1.29
CROCCP4-202ENST00000633627 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.29
CROCCP4-202ENST00000633627 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
CROCCP4-202ENST00000633627 GINM1Q9NU53 330 aa23.14■■□□□ 1.29
CROCCP4-202ENST00000633627 ATAD5Q96QE3 1844 aa23.14■■□□□ 1.29
CROCCP4-202ENST00000633627 PPARAQ07869 468 aa23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 MKRN3Q13064 507 aaKnown RBP23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 PPIL2Q13356 520 aa23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 CERKLQ49MI3 558 aaPredicted RBP23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 ANAPC4Q9UJX5 808 aa23.13■■□□□ 1.29
CROCCP4-202ENST00000633627 PHIPQ8WWQ0 1821 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 IRF6O14896 467 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 CDC45O75419 566 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 GDF11O95390 407 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 ASNSP08243 561 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 ESYT1Q9BSJ8 1104 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 ZBTB21Q9ULJ3 1066 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 MYH8P13535 1937 aa23.12■■□□□ 1.29
CROCCP4-202ENST00000633627 CCDC84Q86UT8 332 aaPredicted RBP23.11■■□□□ 1.29
CROCCP4-202ENST00000633627 MS4A4AQ96JQ5 239 aa23.11■■□□□ 1.29
CROCCP4-202ENST00000633627 KCNH4Q9UQ05 1017 aa23.11■■□□□ 1.29
CROCCP4-202ENST00000633627 ZHX2Q9Y6X8 837 aa23.11■■□□□ 1.29
CROCCP4-202ENST00000633627 GH2P01242 217 aa23.1■■□□□ 1.29
CROCCP4-202ENST00000633627 PTH1RQ03431 593 aa23.1■■□□□ 1.29
CROCCP4-202ENST00000633627 AFG3L2Q9Y4W6 797 aa23.1■■□□□ 1.29
CROCCP4-202ENST00000633627 MANSC4A6NHS7 340 aaPredicted RBP23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 USP17L5A8MUK1 530 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 RASA1P20936 1047 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 GUCY1A2P33402 732 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 ABCB5Q2M3G0 1257 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 REM2Q8IYK8 340 aaPredicted RBP23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 STK11IPQ8N1F8 1099 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 CCDC17Q96LX7 622 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 TACC3Q9Y6A5 838 aa23.09■■□□□ 1.29
CROCCP4-202ENST00000633627 TESPA1A2RU30 521 aaPredicted RBP23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 CXCL11O14625 94 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 FGRP09769 529 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 AKR1B1P15121 316 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 TM4SF4P48230 202 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 CTDSPL2Q05D32 466 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 WDR18Q9BV38 432 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 GTF3C3Q9Y5Q9 886 aa23.08■■□□□ 1.29
CROCCP4-202ENST00000633627 SLC3A2P08195 630 aaKnown RBP23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 GTF2A2P52657 109 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 INHBEP58166 350 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 NBPF3Q9H094 633 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 MKNK2Q9HBH9 465 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 CABP5Q9NP86 173 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 CTNNA3Q9UI47 895 aa23.07■■□□□ 1.28
CROCCP4-202ENST00000633627 PRDM1O75626 825 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 HAND2P61296 217 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 PDE4BQ07343 736 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 SNAPC2Q13487 334 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 SEPT2Q15019 361 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 BRI3BPQ8WY22 251 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 MAP4K1Q92918 833 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 LSG1Q9H089 658 aaKnown RBP23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 ZNF287Q9HBT7 754 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 INCENPQ9NQS7 918 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 PTPRFP10586 1907 aa23.06■■□□□ 1.28
CROCCP4-202ENST00000633627 LAMA4Q16363 1823 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 MAP2K1Q02750 393 aaPredicted RBP23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 SREBF2Q12772 1141 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 SPP2Q13103 211 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 MOGSQ13724 837 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 TMEM179Q6ZVK1 233 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 ZNF280CQ8ND82 737 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 AS3MTQ9HBK9 375 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 WBP1LQ9NX94 342 aa23.05■■□□□ 1.28
CROCCP4-202ENST00000633627 GREB1LQ9C091 1923 aaPredicted RBP23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 A0A0G2JLL6 359 aaPredicted RBP23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 MPHOSPH10O00566 681 aaKnown RBP23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 ZNF213O14771 459 aa23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 ORC4O43929 436 aa23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 CETPP11597 493 aa23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 PRRT2Q7Z6L0 340 aaPredicted RBP23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 TBC1D10CQ8IV04 446 aa23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 PTPN18Q99952 460 aa23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
CROCCP4-202ENST00000633627 CCL15-CCL14A0A0B4J2E2 113 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 TRIM75PA6NK02 468 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 RAB3GAP1Q15042 981 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 CCL15Q16663 113 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 KIAA1211Q6ZU35 1233 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 ZNF444Q8N0Y2 327 aaPredicted RBP23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
CROCCP4-202ENST00000633627 IGF2BP3O00425 579 aaKnown RBP eCLIP23.02■■□□□ 1.28
CROCCP4-202ENST00000633627 PCP11498 1178 aaKnown RBP23.02■■□□□ 1.28
CROCCP4-202ENST00000633627 IMMTQ16891 758 aaKnown RBP23.02■■□□□ 1.28
CROCCP4-202ENST00000633627 AKNAD1Q5T1N1 836 aa23.02■■□□□ 1.28
CROCCP4-202ENST00000633627 SIAH1Q8IUQ4 282 aa23.02■■□□□ 1.28
CROCCP4-202ENST00000633627 IGKV6D-41A0A0C4DH26 115 aa23.01■■□□□ 1.27
CROCCP4-202ENST00000633627 BACE1P56817 501 aa23.01■■□□□ 1.27
CROCCP4-202ENST00000633627 SH3D19Q5HYK7 790 aa23.01■■□□□ 1.27
CROCCP4-202ENST00000633627 IFNL1Q8IU54 200 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms