RNA–Protein interactions for RNA: ENST00000631289.1

CHRNA4-214, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-214ENST00000631289 FARP2O94887 1054 aaPredicted RBP25.42■■□□□ 1.66
CHRNA4-214ENST00000631289 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
CHRNA4-214ENST00000631289 MYH1P12882 1939 aa25.41■■□□□ 1.66
CHRNA4-214ENST00000631289 C19orf81C9J6K1 198 aa25.41■■□□□ 1.66
CHRNA4-214ENST00000631289 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
CHRNA4-214ENST00000631289 CEP85Q6P2H3 762 aa25.41■■□□□ 1.66
CHRNA4-214ENST00000631289 DNAJC18Q9H819 358 aa25.41■■□□□ 1.66
CHRNA4-214ENST00000631289 USP17L10C9JJH3 530 aa25.4■■□□□ 1.66
CHRNA4-214ENST00000631289 GDF11O95390 407 aa25.4■■□□□ 1.66
CHRNA4-214ENST00000631289 TFRCP02786 760 aaKnown RBP25.4■■□□□ 1.66
CHRNA4-214ENST00000631289 USP5P45974 858 aa25.4■■□□□ 1.66
CHRNA4-214ENST00000631289 UBE2Q1Q7Z7E8 422 aa25.4■■□□□ 1.66
CHRNA4-214ENST00000631289 MAP3K12Q12852 859 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 MAGEB6Q8N7X4 407 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 MIGA1Q8NAN2 632 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 DEFB118Q96PH6 123 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 ZBTB21Q9ULJ3 1066 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 EXOC6BQ9Y2D4 811 aa25.39■■□□□ 1.66
CHRNA4-214ENST00000631289 TRIOBPQ9H2D6 2365 aa25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 HOXA7P31268 230 aaPredicted RBP25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 FXR1P51114 621 aaKnown RBP eCLIP25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 HSP90AB4PQ58FF6 505 aa25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 DIEXFQ68CQ4 756 aaKnown RBP25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 TMED8Q6PL24 325 aaPredicted RBP25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 AACSQ86V21 672 aa25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 MORF4L1Q9UBU8 362 aa25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 NR2E3Q9Y5X4 410 aa25.38■■□□□ 1.65
CHRNA4-214ENST00000631289 MS4A1P11836 297 aa25.37■■□□□ 1.65
CHRNA4-214ENST00000631289 JAG1P78504 1218 aa25.37■■□□□ 1.65
CHRNA4-214ENST00000631289 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
CHRNA4-214ENST00000631289 PAK6Q9NQU5 681 aaPredicted RBP25.37■■□□□ 1.65
CHRNA4-214ENST00000631289 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
CHRNA4-214ENST00000631289 HMGCRP04035 888 aa25.36■■□□□ 1.65
CHRNA4-214ENST00000631289 CHRDL2Q6WN34 429 aa25.36■■□□□ 1.65
CHRNA4-214ENST00000631289 P2RX7Q99572 595 aaKnown RBP25.36■■□□□ 1.65
CHRNA4-214ENST00000631289 NDUFB9Q9Y6M9 179 aa25.36■■□□□ 1.65
CHRNA4-214ENST00000631289 HERVK_113P62684 666 aa25.35■■□□□ 1.65
CHRNA4-214ENST00000631289 GPRC5AQ8NFJ5 357 aa25.35■■□□□ 1.65
CHRNA4-214ENST00000631289 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.35■■□□□ 1.65
CHRNA4-214ENST00000631289 GJD2Q9UKL4 321 aa25.35■■□□□ 1.65
CHRNA4-214ENST00000631289 SHROOM1Q2M3G4 852 aaPredicted RBP25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 USP17L2Q6R6M4 530 aa25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 TTC6Q86TZ1 520 aa25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 GTF3C2Q8WUA4 911 aaPredicted RBP25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 ANTXR1Q9H6X2 564 aa25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 SERPINB13Q9UIV8 391 aa25.34■■□□□ 1.65
CHRNA4-214ENST00000631289 GH2P01242 217 aa25.33■■□□□ 1.65
CHRNA4-214ENST00000631289 CCAR1Q8IX12 1150 aaKnown RBP25.33■■□□□ 1.65
CHRNA4-214ENST00000631289 EHD4Q9H223 541 aa25.33■■□□□ 1.65
CHRNA4-214ENST00000631289 TTF1Q15361 905 aaPredicted RBP25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 RHPN1Q8TCX5 695 aa25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 FEZ1Q99689 392 aa25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 CRISPLD2Q9H0B8 497 aa25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 HMX1Q9NP08 348 aaPredicted RBP25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 IL1RAPL2Q9NP60 686 aa25.32■■□□□ 1.64
CHRNA4-214ENST00000631289 EVI5O60447 810 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 PDE3AQ14432 1141 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 TATDN1Q6P1N9 297 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 NUDT12Q9BQG2 462 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 EMILIN3Q9NT22 766 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 RPTORQ8N122 1335 aa25.31■■□□□ 1.64
CHRNA4-214ENST00000631289 PLXNB2O15031 1838 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 HMMRO75330 724 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 CYP2B6P20813 491 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 MAPK4P31152 587 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 CERKLQ49MI3 558 aaPredicted RBP25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 NECAB2Q7Z6G3 386 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 CLASRPQ8N2M8 674 aaKnown RBP25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 SOCS4Q8WXH5 440 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 PAGR1Q9BTK6 254 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 TXNRD2Q9NNW7 524 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 CABP5Q9NP86 173 aa25.3■■□□□ 1.64
CHRNA4-214ENST00000631289 MAGEB6P1A0A0J9YX57 407 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 USP14P54578 494 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 ERVK-9P63128 1117 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 ERVK-24P63145 666 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 RAB3GAP1Q15042 981 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 KIF1BPQ96EK5 621 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 PAWRQ96IZ0 340 aaKnown RBP25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 CWC22Q9HCG8 908 aaKnown RBP25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 RBPJLQ9UBG7 517 aa25.29■■□□□ 1.64
CHRNA4-214ENST00000631289 APBB1O00213 710 aa25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 PEX10O60683 326 aa25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 POLR3DP05423 398 aaPredicted RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 IFIT2P09913 472 aaKnown RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 ZYXQ15942 572 aaKnown RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 ABCB5Q2M3G0 1257 aa25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 RPAP2Q8IXW5 612 aaPredicted RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 TRMT44Q8IYL2 757 aaKnown RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 ANKLE1Q8NAG6 615 aa25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 RBM27Q9P2N5 1060 aaKnown RBP25.28■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L15C9J2P7 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L13C9JLJ4 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L11C9JVI0 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L18D6R9N7 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L22D6RA61 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L17D6RBQ6 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L19D6RCP7 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L20D6RJB6 530 aa25.27■■□□□ 1.64
CHRNA4-214ENST00000631289 USP17L24Q0WX57 530 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms