RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	FBRS	Q9HAH7	460 aa		5.14	□□□□□ -1.59
CNOT1-223	ENST00000628857	BSDC1	Q9NW68	430 aa	Predicted RBP	5.14	□□□□□ -1.59
CNOT1-223	ENST00000628857	TJP2	Q9UDY2	1190 aa		5.14	□□□□□ -1.59
CNOT1-223	ENST00000628857	MAPK8IP1	Q9UQF2	711 aa		5.14	□□□□□ -1.59
CNOT1-223	ENST00000628857	SLITRK5	O94991	958 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	MED26	O95402	600 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	EOMES	O95936	686 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	PLCG1	P19174	1290 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	CYP7A1	P22680	504 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	YARS	P54577	528 aa	Known RBP	5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	OXCT1	P55809	520 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	FAM160A1	Q05DH4	1040 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	COL9A2	Q14055	689 aa	Predicted RBP	5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	NKG7	Q16617	165 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	KIAA0825	Q8IV33	1275 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	STK11IP	Q8N1F8	1099 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	TOP6BL	Q8N6T0	577 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	NETO1	Q8TDF5	533 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	ACSF2	Q96CM8	615 aa	Predicted RBP	5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	SPON2	Q9BUD6	331 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	TNKS2	Q9H2K2	1166 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	LGR6	Q9HBX8	967 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	PCMTD2	Q9NV79	361 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	PODXL2	Q9NZ53	605 aa		5.13	□□□□□ -1.59
CNOT1-223	ENST00000628857	TMEM265	A0A087WTH1	108 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	SCO2	A0A1W2PP80	73 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	WNT11	O96014	354 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	HOXA10	P31260	410 aa	Predicted RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	SSTR4	P31391	388 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	KIR3DL1	P43629	444 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	ZNF165	P49910	485 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	PRAMEF13	Q5VWM6	474 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	UBE3D	Q7Z6J8	389 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	EAF1	Q96JC9	268 aa	Predicted RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	HEXIM2	Q96MH2	286 aa	Known RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	VAV3	Q9UKW4	847 aa		5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.12	□□□□□ -1.59
CNOT1-223	ENST00000628857	LEFTY1	O75610	366 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	HTR3B	O95264	441 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	IMPDH2	P12268	514 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	ETV3	P41162	512 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	RACK1	P63244	317 aa	Known RBP	5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	APOBR	Q0VD83	1088 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	IFI16	Q16666	785 aa	Known RBP	5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	LETMD1	Q6P1Q0	360 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	VSIG10L	Q86VR7	867 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	FBXO27	Q8NI29	283 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	RASGRP4	Q8TDF6	673 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	CYB5D2	Q8WUJ1	264 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	NKD1	Q969G9	470 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	FBXL18	Q96ME1	805 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	REV1	Q9UBZ9	1251 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857	CEP131	Q9UPN4	1083 aa		5.11	□□□□□ -1.59
CNOT1-223	ENST00000628857		F6X3S4	739 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CEACAM5	P06731	702 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CCNF	P41002	786 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CRK	P46108	304 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	HDLBP	Q00341	1268 aa	Known RBP	5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	PRKCQ	Q04759	706 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	SFRP5	Q5T4F7	317 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CDCP2	Q5VXM1	449 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	INTS3	Q68E01	1043 aa	Known RBP	5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	NT5DC4	Q86YG4	428 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CCDC74B	Q96LY2	380 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	TGIF2	Q9GZN2	237 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	BRMS1	Q9HCU9	246 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CCDC39	Q9UFE4	941 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	CORIN	Q9Y5Q5	1042 aa		5.1	□□□□□ -1.59
CNOT1-223	ENST00000628857	SLC22A31	A6NKX4	558 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	MEIS3P2	A8K0S8	358 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	GNAT3	A8MTJ3	354 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	GJA8	P48165	433 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	CLCN7	P51798	805 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	NBPF11	Q86T75	865 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	FAM13C	Q8NE31	585 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	DNAJB8	Q8NHS0	232 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	PIWIL2	Q8TC59	973 aa	Known RBP	5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	PPP1R13L	Q8WUF5	828 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	MIPEP	Q99797	713 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	UBP1	Q9NZI7	540 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	GMIP	Q9P107	970 aa		5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.09	□□□□□ -1.59
CNOT1-223	ENST00000628857	RGS13	O14921	159 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	RAD51AP2	Q09MP3	1159 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	NKPD1	Q17RQ9	610 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	SEZ6	Q53EL9	994 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	ZNF394	Q53GI3	561 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	THAP5	Q7Z6K1	395 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	AGBL5	Q8NDL9	886 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	RIN3	Q8TB24	985 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	ASB11	Q8WXH4	323 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	HRASLS5	Q96KN8	279 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	CNNM2	Q9H8M5	875 aa		5.08	□□□□□ -1.6
CNOT1-223	ENST00000628857	LRRC4C	Q9HCJ2	640 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms