RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 SREBF2Q12772 1141 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 C12orf60Q5U649 245 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 TATDN1Q6P1N9 297 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 CTR9Q6PD62 1173 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.9
CCDC163-204ENST00000628293 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
CCDC163-204ENST00000628293 SLC44A5Q8NCS7 719 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 R3HDMLQ9H3Y0 253 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 SERPINB13Q9UIV8 391 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 AFG3L2Q9Y4W6 797 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 MGAMO43451 1857 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 RLFQ13129 1914 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.9
CCDC163-204ENST00000628293 CCL15-CCL14A0A0B4J2E2 113 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 USP17L21D6R901 530 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 CA12O43570 354 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 GDF11O95390 407 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
CCDC163-204ENST00000628293 GTF2A2P52657 109 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 NMIQ13287 307 aaPredicted RBP9.45□□□□□ -0.9
CCDC163-204ENST00000628293 CCL15Q16663 113 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
CCDC163-204ENST00000628293 VPS53Q5VIR6 699 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 TTC6Q86TZ1 520 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 ZNF589Q86UQ0 364 aaPredicted RBP9.45□□□□□ -0.9
CCDC163-204ENST00000628293 TICAM2Q86XR7 235 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 FAM43AQ8N2R8 423 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 CRACR2BQ8N4Y2 399 aaPredicted RBP9.45□□□□□ -0.9
CCDC163-204ENST00000628293 DYNLL2Q96FJ2 89 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 IL25Q9H293 177 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 ZBTB21Q9ULJ3 1066 aa9.45□□□□□ -0.9
CCDC163-204ENST00000628293 A0A0G2JLL6 359 aaPredicted RBP9.44□□□□□ -0.9
CCDC163-204ENST00000628293 TRPA1O75762 1119 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 POLR3DP05423 398 aaPredicted RBP9.44□□□□□ -0.9
CCDC163-204ENST00000628293 SDSP20132 328 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 GUCY1A2P33402 732 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 LBX1P52954 281 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 INHBEP58166 350 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 SNAPC2Q13487 334 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 SBK1Q52WX2 424 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 GIMAP6Q6P9H5 292 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 PRRT2Q7Z6L0 340 aaPredicted RBP9.44□□□□□ -0.9
CCDC163-204ENST00000628293 RILPL2Q969X0 211 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 HELLSQ9NRZ9 838 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 ARPP21Q9UBL0 812 aaPredicted RBP9.44□□□□□ -0.9
CCDC163-204ENST00000628293 ZHX2Q9Y6X8 837 aa9.44□□□□□ -0.9
CCDC163-204ENST00000628293 A0A0G2JMZ2 1700 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 ADGRA2Q96PE1 1338 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 PATL2C9JE40 543 aaKnown RBP9.43□□□□□ -0.9
CCDC163-204ENST00000628293 BTBD19C9JJ37 291 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 CXCL11O14625 94 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 GH2P01242 217 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 ASNSP08243 561 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 CETPP11597 493 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 GNAT2P19087 354 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 DGKZQ13574 1117 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 GPAT2Q6NUI2 795 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 C16orf86Q6ZW13 317 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 WDR18Q9BV38 432 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 PICK1Q9NRD5 415 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 TACC3Q9Y6A5 838 aa9.43□□□□□ -0.9
CCDC163-204ENST00000628293 HTTP42858 3142 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 ZMYM6O95789 1325 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 CCDC171Q6TFL3 1326 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 TRIM75PA6NK02 468 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 NEFLP07196 543 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 AKR1B1P15121 316 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 CDK8P49336 464 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 SPP2Q13103 211 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 CRHR2Q13324 411 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 CERKLQ49MI3 558 aaPredicted RBP9.42□□□□□ -0.9
CCDC163-204ENST00000628293 MCMDC2Q4G0Z9 681 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 SWAP70Q9UH65 585 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 DOCK3Q8IZD9 2030 aa9.42□□□□□ -0.9
CCDC163-204ENST00000628293 COL11A1P12107 1806 aaPredicted RBP9.42□□□□□ -0.9
CCDC163-204ENST00000628293 ALDH1A1P00352 501 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 HSPD1P10809 573 aaKnown RBP9.41□□□□□ -0.9
CCDC163-204ENST00000628293 RASA1P20936 1047 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 TDO2P48775 406 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 CAP1Q01518 475 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 ALX1Q15699 326 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 ABCB5Q2M3G0 1257 aa9.41□□□□□ -0.9
CCDC163-204ENST00000628293 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
CCDC163-204ENST00000628293 CWC27Q6UX04 472 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms