RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 SDSP20132 328 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 TDO2P48775 406 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 TATDN1Q6P1N9 297 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 NAPBQ9H115 298 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 CABP5Q9NP86 173 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 ROBO3Q96MS0 1386 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
SOX2-OT-245ENST00000628211 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 GSG1L2A8MUP6 293 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 APPP05067 770 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 PTPRAP18433 802 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 GABPAQ06546 454 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 CCDC17Q96LX7 622 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 KCNH4Q9UQ05 1017 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SOX2-OT-245ENST00000628211 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 USP17L12C9JPN9 530 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 USP17L21D6R901 530 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 IRF6O14896 467 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 CHGBP05060 677 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 GJA5P36382 358 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 PLCD1P51178 756 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 NMIQ13287 307 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 CCL15Q16663 113 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 C16orf86Q6ZW13 317 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 FASTKD5Q7L8L6 764 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
SOX2-OT-245ENST00000628211 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 NT5C2P49902 561 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 PDE4BQ07343 736 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 ALX1Q15699 326 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 ABCB5Q2M3G0 1257 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 CTR9Q6PD62 1173 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 ZNF280CQ8ND82 737 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-245ENST00000628211 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 SHMT1P34896 483 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 TMEM179Q6ZVK1 233 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 FAM227BQ96M60 508 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 SLC45A1Q9Y2W3 748 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
SOX2-OT-245ENST00000628211 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 GDF11O95390 407 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 CDK8P49336 464 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 USP14P54578 494 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 CWC27Q6UX04 472 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 BRI3BPQ8WY22 251 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
SOX2-OT-245ENST00000628211 USP17L10C9JJH3 530 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 TRPA1O75762 1119 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 GH2P01242 217 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 CYP2D6P10635 497 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 HSPD1P10809 573 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 PPARAQ07869 468 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 PARK7Q99497 189 aaKnown RBP12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 ZFYVE28Q9HCC9 887 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 TMOD4Q9NZQ9 345 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 PNMA3Q9UL41 463 aa12.73□□□□□ -0.37
SOX2-OT-245ENST00000628211 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
SOX2-OT-245ENST00000628211 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
SOX2-OT-245ENST00000628211 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
SOX2-OT-245ENST00000628211 CHMLP26374 656 aa12.72□□□□□ -0.37
SOX2-OT-245ENST00000628211 BACE1P56817 501 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms