RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 APOBEC3HQ6NTF7 200 aaKnown RBP9.5□□□□□ -0.89
TCF4-260ENST00000627685 TRAF7Q6Q0C0 670 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 RASAL3Q86YV0 1011 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 ZBTB40Q9NUA8 1239 aa9.5□□□□□ -0.89
TCF4-260ENST00000627685 NOP58Q9Y2X3 529 aaKnown RBP9.5□□□□□ -0.89
TCF4-260ENST00000627685 PDS5AQ29RF7 1337 aaKnown RBP9.5□□□□□ -0.89
TCF4-260ENST00000627685 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
TCF4-260ENST00000627685 CTCFP49711 727 aaPredicted RBP9.49□□□□□ -0.89
TCF4-260ENST00000627685 FKBP1BP68106 108 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 ATP8B2P98198 1209 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 PI16Q6UXB8 463 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 GBA2Q9HCG7 927 aaPredicted RBP9.49□□□□□ -0.89
TCF4-260ENST00000627685 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
TCF4-260ENST00000627685 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 RCAN3Q9UKA8 241 aa9.49□□□□□ -0.89
TCF4-260ENST00000627685 TTC24A2A3L6 582 aaPredicted RBP9.48□□□□□ -0.89
TCF4-260ENST00000627685 HSPA8P11142 646 aaKnown RBP9.48□□□□□ -0.89
TCF4-260ENST00000627685 CRKP46108 304 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 WNT7BP56706 349 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 TIMM10P62072 90 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
TCF4-260ENST00000627685 MAP3K11Q16584 847 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 C2orf69Q8N8R5 385 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 BAP1Q92560 729 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 HDAC9Q9UKV0 1011 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
TCF4-260ENST00000627685 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 GAKO14976 1311 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
TCF4-260ENST00000627685 RPAP1Q9BWH6 1393 aaPredicted RBP9.48□□□□□ -0.89
TCF4-260ENST00000627685 SIPA1L1O43166 1804 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 CA12O43570 354 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 DGAT1O75907 488 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 IFIT1P09914 478 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 SLC5A1P13866 664 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 MCAMP43121 646 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 HUNKP57058 714 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 HDLBPQ00341 1268 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 CHAF1AQ13111 956 aaPredicted RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 NOGQ13253 232 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 APOBEC3FQ8IUX4 373 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 ZDHHC15Q96MV8 337 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
TCF4-260ENST00000627685 DEFB129Q9H1M3 183 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 TDRD3Q9H7E2 651 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 ZNF408Q9H9D4 720 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 TOR4AQ9NXH8 423 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 HMG20BQ9P0W2 317 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 ZNF70Q9UC06 446 aaPredicted RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 DBNLQ9UJU6 430 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 DAGLAQ9Y4D2 1042 aa9.47□□□□□ -0.89
TCF4-260ENST00000627685 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
TCF4-260ENST00000627685 POLR2AP24928 1970 aaKnown RBP9.46□□□□□ -0.89
TCF4-260ENST00000627685 LCE2BO14633 110 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 CACNB3P54284 484 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 SH3BP2P78314 561 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 DLGAP5Q15398 846 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 TNNI3KQ59H18 835 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
TCF4-260ENST00000627685 RGMBQ6NW40 437 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 EAF2Q96CJ1 260 aaPredicted RBP9.46□□□□□ -0.9
TCF4-260ENST00000627685 DBNDD2Q9BQY9 259 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 MRIQ9BWK5 157 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 CEP126Q9P2H0 1117 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 SUGT1Q9Y2Z0 365 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 DOCK2Q92608 1830 aa9.46□□□□□ -0.9
TCF4-260ENST00000627685 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
TCF4-260ENST00000627685 NFIAQ12857 509 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 RASA3Q14644 834 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 HHIPL2Q6UWX4 724 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
TCF4-260ENST00000627685 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
TCF4-260ENST00000627685 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
TCF4-260ENST00000627685 UBE2Q2LH0YL09 131 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 SLURP2P0DP57 97 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 LBX1P52954 281 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 RHBDL3P58872 404 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
TCF4-260ENST00000627685 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms