RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MFSD14BQ5SR56 506 aa25.56■■□□□ 1.68
PNKP-220ENST00000627232 MASTLQ96GX5 879 aa25.56■■□□□ 1.68
PNKP-220ENST00000627232 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.56■■□□□ 1.68
PNKP-220ENST00000627232 FOCADQ5VW36 1801 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 BTDP43251 543 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 TROAPQ12815 778 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 SAFBQ15424 915 aaKnown RBP eCLIP25.55■■□□□ 1.68
PNKP-220ENST00000627232 CAMK4Q16566 473 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 MPNDQ8N594 471 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 ENGASEQ8NFI3 743 aa25.55■■□□□ 1.68
PNKP-220ENST00000627232 MMP1P03956 469 aa25.54■■□□□ 1.68
PNKP-220ENST00000627232 EVX2Q03828 476 aa25.54■■□□□ 1.68
PNKP-220ENST00000627232 HS1BP3Q53T59 392 aa25.54■■□□□ 1.68
PNKP-220ENST00000627232 FSIP1Q8NA03 581 aa25.54■■□□□ 1.68
PNKP-220ENST00000627232 MRPS27Q92552 414 aaKnown RBP25.54■■□□□ 1.68
PNKP-220ENST00000627232 GOLPH3LQ9H4A5 285 aa25.54■■□□□ 1.68
PNKP-220ENST00000627232 TSPY2A6NKD2 308 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 PRPF3O43395 683 aaKnown RBP25.53■■□□□ 1.68
PNKP-220ENST00000627232 GUCY1A2P33402 732 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 AKAP17AQ02040 695 aaKnown RBP25.53■■□□□ 1.68
PNKP-220ENST00000627232 SLC39A14Q15043 492 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 ANKS1AQ92625 1134 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 TYRO3Q06418 890 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 FUT2Q10981 343 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 SNW1Q13573 536 aaKnown RBP25.53■■□□□ 1.68
PNKP-220ENST00000627232 TGFBRAP1Q8WUH2 860 aa25.53■■□□□ 1.68
PNKP-220ENST00000627232 TMX4Q9H1E5 349 aaPredicted RBP25.53■■□□□ 1.68
PNKP-220ENST00000627232 FOXP1Q9H334 677 aaPredicted RBP25.53■■□□□ 1.68
PNKP-220ENST00000627232 MYH1P12882 1939 aa25.52■■□□□ 1.68
PNKP-220ENST00000627232 PPP6R2O75170 966 aa25.52■■□□□ 1.68
PNKP-220ENST00000627232 FAM47AQ5JRC9 791 aa25.52■■□□□ 1.68
PNKP-220ENST00000627232 ZC3H12CQ9C0D7 883 aaKnown RBP25.52■■□□□ 1.68
PNKP-220ENST00000627232 TCP11L1Q9NUJ3 509 aa25.52■■□□□ 1.68
PNKP-220ENST00000627232 UBE2Q2LH0YL09 131 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 KINO60870 393 aaKnown RBP25.51■■□□□ 1.67
PNKP-220ENST00000627232 XBP1P17861 261 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 DGKHQ86XP1 1220 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 JMYQ8N9B5 988 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 ZNF287Q9HBT7 754 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 MRVI1Q9Y6F6 885 aa25.51■■□□□ 1.67
PNKP-220ENST00000627232 SASS6Q6UVJ0 657 aa25.5■■□□□ 1.67
PNKP-220ENST00000627232 DPP8Q6V1X1 898 aaPredicted RBP25.5■■□□□ 1.67
PNKP-220ENST00000627232 TMTC3Q6ZXV5 915 aa25.5■■□□□ 1.67
PNKP-220ENST00000627232 CKAP2LQ8IYA6 745 aa25.5■■□□□ 1.67
PNKP-220ENST00000627232 TEX11Q8IYF3 940 aa25.5■■□□□ 1.67
PNKP-220ENST00000627232 CTCFLQ8NI51 663 aaPredicted RBP25.5■■□□□ 1.67
PNKP-220ENST00000627232 MAP3K14Q99558 947 aa25.5■■□□□ 1.67
PNKP-220ENST00000627232 CAVIN2O95810 425 aa25.49■■□□□ 1.67
PNKP-220ENST00000627232 GTF2IP78347 998 aa25.49■■□□□ 1.67
PNKP-220ENST00000627232 RCSD1Q6JBY9 416 aa25.49■■□□□ 1.67
PNKP-220ENST00000627232 DIS3L2Q8IYB7 885 aaKnown RBP25.49■■□□□ 1.67
PNKP-220ENST00000627232 CMTR1Q8N1G2 835 aaKnown RBP25.49■■□□□ 1.67
PNKP-220ENST00000627232 FAM200AQ8TCP9 573 aa25.49■■□□□ 1.67
PNKP-220ENST00000627232 EYA3Q99504 573 aa25.49■■□□□ 1.67
PNKP-220ENST00000627232 RIMBP2O15034 1052 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 RHBDL3P58872 404 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 TFAP4Q01664 338 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 PTPAQ15257 358 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 AXDND1Q5T1B0 1012 aaPredicted RBP25.48■■□□□ 1.67
PNKP-220ENST00000627232 STYK1Q6J9G0 422 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 MAPKAPK5Q8IW41 473 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 FMR1NBQ8N0W7 255 aaPredicted RBP25.48■■□□□ 1.67
PNKP-220ENST00000627232 CCDC82Q8N4S0 544 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 MKNK2Q9HBH9 465 aa25.48■■□□□ 1.67
PNKP-220ENST00000627232 NMT2O60551 498 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 CMA1P23946 247 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 PKN1Q16512 942 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 DYNLL2Q96FJ2 89 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.47■■□□□ 1.67
PNKP-220ENST00000627232 BTBD18B2RXH4 712 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 PLEKHA8P1O95397 391 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 KIF5BP33176 963 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 ZNF444Q8N0Y2 327 aaPredicted RBP25.47■■□□□ 1.67
PNKP-220ENST00000627232 KCNJ14Q9UNX9 436 aa25.47■■□□□ 1.67
PNKP-220ENST00000627232 FLT1P17948 1338 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 CNTNAP5Q8WYK1 1306 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 ESPNB1AK53 854 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 RILPL1Q5EBL4 403 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 MSL1Q68DK7 614 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 C16orf86Q6ZW13 317 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 C2CD5Q86YS7 1000 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 KAT14Q9H8E8 782 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 IL17RBQ9NRM6 502 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 DAGLAQ9Y4D2 1042 aa25.46■■□□□ 1.67
PNKP-220ENST00000627232 SLC15A2Q16348 729 aa25.45■■□□□ 1.66
PNKP-220ENST00000627232 H0YIN7 160 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 TSPY3P0CV98 308 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 TSPY8P0CW00 308 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 RASA1P20936 1047 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 PLCD1P51178 756 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 PHF20Q9BVI0 1012 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 SAP30BPQ9UHR5 308 aaKnown RBP25.44■■□□□ 1.66
PNKP-220ENST00000627232 V9GY48 417 aaPredicted RBP25.44■■□□□ 1.66
PNKP-220ENST00000627232 EP400Q96L91 3159 aa25.44■■□□□ 1.66
PNKP-220ENST00000627232 FAM237AA0A1B0GTK4 181 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 A0A1B0GVL5 298 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 CUTAO60888 179 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 NDUFA8P51970 172 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 SLC4A8Q2Y0W8 1093 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 853.9 ms