RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
SOX2-OT-241ENST00000626948 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
SOX2-OT-241ENST00000626948 TCRBV5S4A2TA0A5A2 114 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 APBB1O00213 710 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 TNPO2O14787 897 aaKnown RBP16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 GJB1P08034 283 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 ASNSP08243 561 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 PLCD1P51178 756 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 IRF5Q13568 498 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 ERC1Q8IUD2 1116 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
SOX2-OT-241ENST00000626948 HOXA7P31268 230 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-241ENST00000626948 RPAP2Q8IXW5 612 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-241ENST00000626948 SLAIN1Q8ND83 568 aa16.49■□□□□ 0.23
SOX2-OT-241ENST00000626948 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
SOX2-OT-241ENST00000626948 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
SOX2-OT-241ENST00000626948 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 GH2P01242 217 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 INHAP05111 366 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 PDE6AP16499 860 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 TRIM32Q13049 653 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 Q3C1V9 767 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 CRACR2BQ8N4Y2 399 aaPredicted RBP16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 AS3MTQ9HBK9 375 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 PNMA3Q9UL41 463 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 DDX19BQ9UMR2 479 aa16.48■□□□□ 0.23
SOX2-OT-241ENST00000626948 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 SHMT1P34896 483 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 GABPAQ06546 454 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 EHD4Q9H223 541 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
SOX2-OT-241ENST00000626948 H0YGN5 161 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 GOLIM4O00461 696 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 USP5P45974 858 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 HERVK_113P62684 666 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 LCORLQ8N3X6 602 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 COLQQ9Y215 455 aaPredicted RBP16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
SOX2-OT-241ENST00000626948 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 C19orf81C9J6K1 198 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 CNMDO75829 334 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 SGPL1O95470 568 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 HLA-DOAP06340 250 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 CYP2D6P10635 497 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 UBXN2AP68543 259 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 SLC9C2Q5TAH2 1124 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 SDR42E1Q8WUS8 393 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 PORCNQ9H237 461 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 GINM1Q9NU53 330 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
SOX2-OT-241ENST00000626948 PRKAB2O43741 272 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 COA7Q96BR5 231 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 C12orf42Q96LP6 360 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 DEFB118Q96PH6 123 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
SOX2-OT-241ENST00000626948 RLFQ13129 1914 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 MS4A1P11836 297 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 SLC44A5Q8NCS7 719 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 NKX2-3Q8TAU0 364 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 TRIB2Q92519 343 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 USP6NLQ92738 828 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 BOLA2Q9H3K6 86 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 TMOD4Q9NZQ9 345 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 LAMA3Q16787 3333 aa16.43■□□□□ 0.22
SOX2-OT-241ENST00000626948 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 ATP5JP18859 108 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 ADD2P35612 726 aa16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 FXR1P51114 621 aaKnown RBP eCLIP16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 TTF1Q15361 905 aaPredicted RBP16.42■□□□□ 0.22
SOX2-OT-241ENST00000626948 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms