RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
TCF4-253ENST00000626466 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 GDF11O95390 407 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 BACE1P56817 501 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 HERVK_113P62684 666 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
TCF4-253ENST00000626466 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
TCF4-253ENST00000626466 LHX8Q68G74 356 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 USP6NLQ92738 828 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 NEUROD6Q96NK8 337 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
TCF4-253ENST00000626466 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
TCF4-253ENST00000626466 ARID4AP29374 1257 aaPredicted RBP13.08□□□□□ -0.32
TCF4-253ENST00000626466 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCF4-253ENST00000626466 MAPKAPK5Q8IW41 473 aa13.08□□□□□ -0.32
TCF4-253ENST00000626466 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
TCF4-253ENST00000626466 COL25A1Q9BXS0 654 aaPredicted RBP13.08□□□□□ -0.32
TCF4-253ENST00000626466 SNRKQ9NRH2 765 aa13.08□□□□□ -0.32
TCF4-253ENST00000626466 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
TCF4-253ENST00000626466 GSTO1P78417 241 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 MORN1Q5T089 497 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 GPR142Q7Z601 462 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
TCF4-253ENST00000626466 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 AS3MTQ9HBK9 375 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
TCF4-253ENST00000626466 FLRT1Q9NZU1 646 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
TCF4-253ENST00000626466 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 FLT1P17948 1338 aa13.07□□□□□ -0.32
TCF4-253ENST00000626466 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 CNMDO75829 334 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 LDHCP07864 332 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
TCF4-253ENST00000626466 ERVK-9P63128 1117 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 ERVK-24P63145 666 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 MTX1Q13505 466 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 SOCS4Q8WXH5 440 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 FAM161BQ96MY7 647 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 API5Q9BZZ5 524 aaKnown RBP13.06□□□□□ -0.32
TCF4-253ENST00000626466 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 SAP30BPQ9UHR5 308 aaKnown RBP13.06□□□□□ -0.32
TCF4-253ENST00000626466 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 MAST2Q6P0Q8 1798 aa13.06□□□□□ -0.32
TCF4-253ENST00000626466 MAPK4P31152 587 aa13.05□□□□□ -0.32
TCF4-253ENST00000626466 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
TCF4-253ENST00000626466 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
TCF4-253ENST00000626466 APBA2Q99767 749 aa13.05□□□□□ -0.32
TCF4-253ENST00000626466 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
TCF4-253ENST00000626466 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
TCF4-253ENST00000626466 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 MAP4K4O95819 1239 aaPredicted RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 ASNSP08243 561 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 RGS2P41220 211 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 DYNLL1P63167 89 aaKnown RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 NAA16Q6N069 864 aaPredicted RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 PIH1D3Q9NQM4 214 aaKnown RBP13.04□□□□□ -0.32
TCF4-253ENST00000626466 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
TCF4-253ENST00000626466 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
TCF4-253ENST00000626466 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 GH2P01242 217 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
TCF4-253ENST00000626466 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
TCF4-253ENST00000626466 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
TCF4-253ENST00000626466 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
TCF4-253ENST00000626466 ZAP70P43403 619 aa13.02□□□□□ -0.33
TCF4-253ENST00000626466 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
TCF4-253ENST00000626466 PPP4CP60510 307 aa13.02□□□□□ -0.33
TCF4-253ENST00000626466 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.02□□□□□ -0.33
TCF4-253ENST00000626466 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
TCF4-253ENST00000626466 NPLOC4Q8TAT6 608 aa13.02□□□□□ -0.33
TCF4-253ENST00000626466 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
TCF4-253ENST00000626466 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
TCF4-253ENST00000626466 BTBD7Q9P203 1132 aa13.02□□□□□ -0.33
TCF4-253ENST00000626466 GNAI3P08754 354 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 CYP2C19P33261 490 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 EVX2Q03828 476 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
TCF4-253ENST00000626466 TRMT44Q8IYL2 757 aaKnown RBP13.01□□□□□ -0.33
TCF4-253ENST00000626466 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms