RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 LTKP29376 864 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 STX1AQ16623 288 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 GSTA5Q7RTV2 222 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 MTUS1Q9ULD2 1270 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
VPS8-227ENST00000625842 ABL1P00519 1130 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 FDX1P10109 184 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
VPS8-227ENST00000625842 RNF123Q5XPI4 1314 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 CETN3O15182 167 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 RAD17O75943 681 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 C6orf163Q5TEZ5 329 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
VPS8-227ENST00000625842 CAPN9O14815 690 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 TRAK2O60296 914 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 KRT5P13647 590 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 USH1GQ495M9 461 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 CNNM4Q6P4Q7 775 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 E7EVH7 732 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 TNPO2O14787 897 aaKnown RBP12.38□□□□□ -0.43
VPS8-227ENST00000625842 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 PODNQ7Z5L7 613 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 MTERF4Q7Z6M4 381 aaKnown RBP12.38□□□□□ -0.43
VPS8-227ENST00000625842 AFAP1L2Q8N4X5 818 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
VPS8-227ENST00000625842 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
VPS8-227ENST00000625842 CD19P15391 556 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 NCAPH2Q6IBW4 605 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 SLFN12Q8IYM2 578 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 TEKT3Q9BXF9 490 aa12.38□□□□□ -0.43
VPS8-227ENST00000625842 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 CCDC50Q8IVM0 306 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 NDUFAF2Q8N183 169 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 STMN4Q9H169 189 aaPredicted RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 FAM8A1Q9UBU6 413 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 EIF2AK4Q9P2K8 1649 aaKnown RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 BTDP43251 543 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 TFAP4Q01664 338 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 SCNN1DP51172 638 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS8-227ENST00000625842 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
VPS8-227ENST00000625842 SLC7A3Q8WY07 619 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 DONSONQ9NYP3 566 aa12.37□□□□□ -0.43
VPS8-227ENST00000625842 KIAA0556O60303 1618 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 TAF5LO75529 589 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 CRCPO75575 148 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 GRAPQ13588 217 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 POSTNQ15063 836 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 ARID3AQ99856 593 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 ARMT1Q9H993 441 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 C21orf2O43822 256 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 ANXA13P27216 316 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 MCM7P33993 719 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 TNNI3KQ59H18 835 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 FPGT-TNNI3KV9GXZ4 949 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 CLRN2A0PK11 232 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 URGCPQ8TCY9 931 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 AMNQ9BXJ7 453 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 LARSQ9P2J5 1176 aaKnown RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 GJB2P29033 226 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms