RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 AGTPBP1Q9UPW5 1226 aa24.09■■□□□ 1.45
R3HCC1-210ENST00000625275 RRP1BQ14684 758 aaKnown RBP24.08■■□□□ 1.45
R3HCC1-210ENST00000625275 HAUS7Q99871 368 aa24.08■■□□□ 1.45
R3HCC1-210ENST00000625275 TMEM106CQ9BVX2 250 aa24.08■■□□□ 1.45
R3HCC1-210ENST00000625275 FMNL1O95466 1100 aaPredicted RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 OSBPP22059 807 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 HOXD10P28358 340 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 DYNLL1P63167 89 aaKnown RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 PRPF38BQ5VTL8 546 aaKnown RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 ZNF280CQ8ND82 737 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 SH3TC2Q8TF17 1288 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 DNAJC2Q99543 621 aaKnown RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 SPP2Q13103 211 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 CERS3Q8IU89 383 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 MAGEB6Q8N7X4 407 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 PROCA1Q8NCQ7 364 aaPredicted RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 SMCR8Q8TEV9 937 aaPredicted RBP24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 ANTXR1Q9H6X2 564 aa24.07■■□□□ 1.44
R3HCC1-210ENST00000625275 MYPNQ86TC9 1320 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 BRCA2P51587 3418 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 USP17L5A8MUK1 530 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 FCGRTP55899 365 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 MAP3K12Q12852 859 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 TMED8Q6PL24 325 aaPredicted RBP24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 CRACR2BQ8N4Y2 399 aaPredicted RBP24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 MIGA1Q8NAN2 632 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 DNAJC18Q9H819 358 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 PALD1Q9ULE6 856 aa24.06■■□□□ 1.44
R3HCC1-210ENST00000625275 EN2P19622 333 aaPredicted RBP24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 TREML2Q5T2D2 321 aa24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 METTL16Q86W50 562 aaKnown RBP24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 FOXP4Q8IVH2 680 aaPredicted RBP24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 EDC3Q96F86 508 aaKnown RBP24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 TRIM34Q9BYJ4 488 aa24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 AS3MTQ9HBK9 375 aa24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 SAP30BPQ9UHR5 308 aaKnown RBP24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 PNMA3Q9UL41 463 aa24.05■■□□□ 1.44
R3HCC1-210ENST00000625275 BAZ2AQ9UIF9 1905 aaKnown RBP24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 GOLIM4O00461 696 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 HLA-DOAP06340 250 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 ASNSP08243 561 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 HMGCS2P54868 508 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 SLC4A8Q2Y0W8 1093 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 RAET1EQ8TD07 263 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 PAG1Q9NWQ8 432 aa24.04■■□□□ 1.44
R3HCC1-210ENST00000625275 CEP290O15078 2479 aa24.03■■□□□ 1.44
R3HCC1-210ENST00000625275 MYCP01106 439 aaPredicted RBP24.03■■□□□ 1.44
R3HCC1-210ENST00000625275 TTF1Q15361 905 aaPredicted RBP24.02■■□□□ 1.44
R3HCC1-210ENST00000625275 TTC22Q5TAA0 569 aa24.02■■□□□ 1.44
R3HCC1-210ENST00000625275 MKI67P46013 3256 aaKnown RBP24.02■■□□□ 1.44
R3HCC1-210ENST00000625275 USP5P45974 858 aa24.01■■□□□ 1.43
R3HCC1-210ENST00000625275 PRKCZQ05513 592 aa24.01■■□□□ 1.43
R3HCC1-210ENST00000625275 SH3D19Q5HYK7 790 aa24.01■■□□□ 1.43
R3HCC1-210ENST00000625275 WDR18Q9BV38 432 aa24.01■■□□□ 1.43
R3HCC1-210ENST00000625275 GINM1Q9NU53 330 aa24.01■■□□□ 1.43
R3HCC1-210ENST00000625275 GSPT1P15170 499 aaKnown RBP24■■□□□ 1.43
R3HCC1-210ENST00000625275 GRK4P32298 578 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 PABPC4Q13310 644 aaKnown RBP eCLIP24■■□□□ 1.438e-7■□□□□ 8.3
R3HCC1-210ENST00000625275 PLXNB2O15031 1838 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 GDF11O95390 407 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 JAG1P78504 1218 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 MTMR2Q13614 643 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 FAM110CQ1W6H9 321 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 ANKRD13CQ8N6S4 541 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 ZBTB21Q9ULJ3 1066 aa24■■□□□ 1.43
R3HCC1-210ENST00000625275 TNPO2O14787 897 aaKnown RBP23.98■■□□□ 1.43
R3HCC1-210ENST00000625275 BACE1P56817 501 aa23.98■■□□□ 1.43
R3HCC1-210ENST00000625275 SHROOM1Q2M3G4 852 aaPredicted RBP23.98■■□□□ 1.43
R3HCC1-210ENST00000625275 RIOK1Q9BRS2 568 aaKnown RBP23.98■■□□□ 1.43
R3HCC1-210ENST00000625275 GABRQQ9UN88 632 aa23.98■■□□□ 1.43
R3HCC1-210ENST00000625275 PDE6AP16499 860 aa23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 GCLCP48506 637 aaPredicted RBP23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 MTFR1Q15390 333 aa23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 SLAIN1Q8ND83 568 aa23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 ASCC2Q9H1I8 757 aaPredicted RBP23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 EHD4Q9H223 541 aa23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 TMOD4Q9NZQ9 345 aa23.97■■□□□ 1.43
R3HCC1-210ENST00000625275 MAGEB6P1A0A0J9YX57 407 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 TRIM6-TRIM34B2RNG4 842 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 KBTBD3Q8NAB2 608 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 EVI5LQ96CN4 794 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 SERPINB13Q9UIV8 391 aa23.96■■□□□ 1.43
R3HCC1-210ENST00000625275 TTC6Q86TZ1 520 aa23.95■■□□□ 1.42
R3HCC1-210ENST00000625275 C19orf81C9J6K1 198 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 USP17L10C9JJH3 530 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 SLC34A2O95436 690 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 FLT3LGP49771 235 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 UBXN2AP68543 259 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 RILPL2Q969X0 211 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 BIN2Q9UBW5 565 aaPredicted RBP23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 ZNF532Q9HCE3 1301 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 ADCY3O60266 1144 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 GH2P01242 217 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 SDSP20132 328 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 IRX3P78415 501 aaPredicted RBP23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 IRF5Q13568 498 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 BMP2KLQ5H9B9 411 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 TATDN1Q6P1N9 297 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 COA7Q96BR5 231 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms