RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 GSTO1P78417 241 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 FGD1P98174 961 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 EVX2Q03828 476 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 GABPB1Q06547 395 aaPredicted RBP20.35■□□□□ 0.85
PCF11-207ENST00000624931 LRMPQ12912 555 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
PCF11-207ENST00000624931 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 NRBP1Q9UHY1 535 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 JAK2O60674 1132 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 BTDP43251 543 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 FAM160A1Q05DH4 1040 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 CEP57L1Q8IYX8 460 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 PSMD1Q99460 953 aa20.34■□□□□ 0.85
PCF11-207ENST00000624931 NEDD4P46934 1319 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 ADD1P35611 737 aaKnown RBP20.33■□□□□ 0.85
PCF11-207ENST00000624931 SCNN1DP51172 638 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 PTPN14Q15678 1187 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 BCS1LQ9Y276 419 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 FER1L6Q2WGJ9 1857 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 CDK5RAP2Q96SN8 1893 aa20.33■□□□□ 0.85
PCF11-207ENST00000624931 SCRN1Q12765 414 aa20.33■□□□□ 0.84
PCF11-207ENST00000624931 DACT2Q5SW24 774 aa20.33■□□□□ 0.84
PCF11-207ENST00000624931 FBXL16Q8N461 479 aa20.33■□□□□ 0.84
PCF11-207ENST00000624931 NSUN7Q8NE18 718 aaKnown RBP20.33■□□□□ 0.84
PCF11-207ENST00000624931 ZNF274Q96GC6 653 aaPredicted RBP20.33■□□□□ 0.84
PCF11-207ENST00000624931 CRNKL1Q9BZJ0 848 aaKnown RBP20.33■□□□□ 0.84
PCF11-207ENST00000624931 TTF2Q9UNY4 1162 aaKnown RBP20.33■□□□□ 0.84
PCF11-207ENST00000624931 LAMB1P07942 1786 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 NAV1Q8NEY1 1877 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 FAM193AP78312 1265 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 SLC4A8Q2Y0W8 1093 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 TAF3Q5VWG9 929 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 LARGE2Q8N3Y3 721 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 SPON1Q9HCB6 807 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 DAGLAQ9Y4D2 1042 aa20.32■□□□□ 0.84
PCF11-207ENST00000624931 GAKO14976 1311 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 MINDY4BA8MYZ0 360 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 NRDCO43847 1150 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 DTNBO60941 627 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 CYP2D6P10635 497 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 U2AF2P26368 475 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCF11-207ENST00000624931 KCNJ6P48051 423 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 NYAP1Q6ZVC0 841 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 MB21D2Q8IYB1 491 aaPredicted RBP20.31■□□□□ 0.84
PCF11-207ENST00000624931 BPIFA3Q9BQP9 254 aa20.31■□□□□ 0.84
PCF11-207ENST00000624931 GPHNQ9NQX3 736 aaPredicted RBP20.31■□□□□ 0.84
PCF11-207ENST00000624931 PSME4Q14997 1843 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 USP17L3A6NCW0 530 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 USP17L4A6NCW7 530 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 LDHCP07864 332 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 ANTXR2P58335 489 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 USP17L1Q7RTZ2 530 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 ENGASEQ8NFI3 743 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 ERO1AQ96HE7 468 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 DCP1AQ9NPI6 582 aaPredicted RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 DDX41Q9UJV9 622 aaKnown RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 PCDHAC2Q9Y5I4 1007 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 MORC2Q9Y6X9 1032 aaPredicted RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 GOLGB1Q14789 3259 aaKnown RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 MYH15Q9Y2K3 1946 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 GPR75-ASB3A0A0A6YYF3 556 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 NFKBIEO00221 500 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 SKILP12757 684 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 TPM4P67936 248 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 EXOSC10Q01780 885 aaKnown RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 PPARAQ07869 468 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 CCDC144BQ3MJ40 725 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 STRIP1Q5VSL9 837 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 ZNF397Q8NF99 534 aaPredicted RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 KIF18AQ8NI77 898 aa20.3■□□□□ 0.84
PCF11-207ENST00000624931 NOL10Q9BSC4 688 aaKnown RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 OSBPL5Q9H0X9 879 aaPredicted RBP20.3■□□□□ 0.84
PCF11-207ENST00000624931 PPP4CP60510 307 aa20.29■□□□□ 0.84
PCF11-207ENST00000624931 SNW1Q13573 536 aaKnown RBP20.29■□□□□ 0.84
PCF11-207ENST00000624931 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
PCF11-207ENST00000624931 CTR9Q6PD62 1173 aa20.29■□□□□ 0.84
PCF11-207ENST00000624931 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
PCF11-207ENST00000624931 PTPDC1A2A3K4 754 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 B4E1Z4 1266 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 IGSF3O75054 1194 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 RAD17O75943 681 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 BAG3O95817 575 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
PCF11-207ENST00000624931 RASSF7Q02833 373 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 C11orf57Q6ZUT1 292 aaPredicted RBP20.28■□□□□ 0.84
PCF11-207ENST00000624931 RALYLQ86SE5 291 aaKnown RBP20.28■□□□□ 0.84
PCF11-207ENST00000624931 CCDC150Q8NCX0 1101 aa20.28■□□□□ 0.84
PCF11-207ENST00000624931 NCOA7Q8NI08 942 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms