RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 A0A087WWV3 80 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 A0A0D9SFI3 127 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 INSRP06213 1382 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PFKFB1P16118 471 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 MAGEA1P43355 309 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 CALCOCO2Q13137 446 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PICALMQ13492 652 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 TRIM14Q14142 442 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PLS1Q14651 629 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PPP1R7Q15435 360 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF827Q17R98 1081 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF772Q68DY9 489 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC50Q8IVM0 306 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 KLHL7Q8IXQ5 586 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ARMT1Q9H993 441 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 SLAIN2Q9P270 581 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 ATP6V0A2Q9Y487 856 aa6.31□□□□□ -1.4
ERCC6-213ENST00000624341 PPLO60437 1756 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NRXN1Q9ULB1 1477 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 CABLES1Q8TDN4 633 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 APPBP2Q92624 585 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 CABS1Q96KC9 395 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SEC62Q99442 399 aaKnown RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 HINFPQ9BQA5 517 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 BLZF1Q9H2G9 400 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SERTAD1Q9UHV2 236 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SPATA31E1Q6ZUB1 1445 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 E7EWF7 191 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 AKNAD1Q5T1N1 836 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NBPF6Q5VWK0 638 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 HS2ST1Q7LGA3 356 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NBPF5PQ86XG9 351 aaPredicted RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 UNC5CLQ8IV45 518 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 XAGE2Q96GT9 111 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NBPF4Q96M43 638 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 NIP7Q9Y221 180 aaKnown RBP eCLIP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 KAT6BQ8WYB5 2073 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 GNA11P29992 359 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 DMTNQ08495 405 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 ADCK5Q3MIX3 580 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 POTEDQ86YR6 584 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 IFT20Q8IY31 132 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC26Q8TAB7 109 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 CACTINQ8WUQ7 758 aaKnown RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 PPP2R2CQ9Y2T4 447 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 A0A1B0GUA9 196 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 WDR78Q5VTH9 848 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 KIAA1524Q8TCG1 905 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 DDX12PQ92771 950 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 METTL22Q9BUU2 404 aaPredicted RBP6.3□□□□□ -1.4
ERCC6-213ENST00000624341 ZSWIM6Q9HCJ5 1215 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 FANCLQ9NW38 375 aa6.3□□□□□ -1.4
ERCC6-213ENST00000624341 ATP2A1O14983 1001 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 CEP104O60308 925 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 PLCD1P51178 756 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 GSTO1P78417 241 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 LACTBP83111 547 aaPredicted RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 BRD3Q15059 726 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 TTC38Q5R3I4 469 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 EAF2Q96CJ1 260 aaPredicted RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 CEP83Q9Y592 693 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 ERBB4Q15303 1308 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 XRN1Q8IZH2 1706 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 FAM13AO94988 1023 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 PTPN21Q16825 1174 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SSH3Q8TE77 659 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 MKRN1Q9UHC7 482 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 PCDHA7Q9UN72 937 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 EFCAB8A8MWE9 144 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SEC31AO94979 1220 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 CLNS1AP54105 237 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 CTDSPL2Q05D32 466 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 PPFIA1Q13136 1202 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 ZNF790Q6PG37 636 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 DZIP3Q86Y13 1208 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 CCDC63Q8NA47 563 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SMARCC2Q8TAQ2 1214 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 SAR1BQ9Y6B6 198 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 COL16A1Q07092 1604 aaPredicted RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 FAM170AA1A519 330 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 GCP02774 474 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 NELFBQ8WX92 580 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 MRRFQ96E11 262 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 ADD1P35611 737 aaKnown RBP6.29□□□□□ -1.4
ERCC6-213ENST00000624341 TXKP42681 527 aa6.29□□□□□ -1.4
ERCC6-213ENST00000624341 NDUFA8P51970 172 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms