RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 SELENOOQ9BVL4 669 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 MYO1FO00160 1098 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 KIAA0754O94854 1291 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 GIMAP7Q8NHV1 300 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 NCOA7Q8NI08 942 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
PMS1-221ENST00000624204 UTYO14607 1347 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 MYBL2P10244 700 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 PLCD1P51178 756 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 ERVK-24P63145 666 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
PMS1-221ENST00000624204 DONSONQ9NYP3 566 aa17.15■□□□□ 0.34
PMS1-221ENST00000624204 N4BP3O15049 544 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 FGAP02671 866 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 MCM3P25205 808 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 TDO2P48775 406 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
PMS1-221ENST00000624204 MORC3Q14149 939 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
PMS1-221ENST00000624204 VPS16Q9H269 839 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 NDUFAB1O14561 156 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
PMS1-221ENST00000624204 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 ANTXR2P58335 489 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
PMS1-221ENST00000624204 RFX7Q2KHR2 1363 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 CCDC196A0A1B0GTZ2 297 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 RDXP35241 583 aaKnown RBP17.13■□□□□ 0.33
PMS1-221ENST00000624204 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 OTUD6BQ8N6M0 293 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 KRT9P35527 623 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 ATP1A2P50993 1020 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 PPFIA1Q13136 1202 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 RNF187Q5TA31 235 aaPredicted RBP17.13■□□□□ 0.33
PMS1-221ENST00000624204 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
PMS1-221ENST00000624204 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
PMS1-221ENST00000624204 SAR1BQ9Y6B6 198 aa17.13■□□□□ 0.33
PMS1-221ENST00000624204 A0A087WZG4 1122 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 ZNF213O14771 459 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 ATP1A1P05023 1023 aaKnown RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 AMPD2Q01433 879 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 KCTD16Q68DU8 428 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 BTBD18B2RXH4 712 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 AGPSO00116 658 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 CYP26C1Q6V0L0 522 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
PMS1-221ENST00000624204 CABS1Q96KC9 395 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 CHP1Q99653 195 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 SLC26A6Q9BXS9 759 aa17.12■□□□□ 0.33
PMS1-221ENST00000624204 CDKL5O76039 1030 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 RUFY1Q96T51 708 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 ABHD10Q9NUJ1 306 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 FMN2Q9NZ56 1722 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 RNF225M0QZC1 329 aaPredicted RBP17.11■□□□□ 0.33
PMS1-221ENST00000624204 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
PMS1-221ENST00000624204 PDCLQ13371 301 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 CCDC122Q5T0U0 273 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
PMS1-221ENST00000624204 LAMA4Q16363 1823 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 SHOX2O60902 331 aaPredicted RBP17.11■□□□□ 0.33
PMS1-221ENST00000624204 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
PMS1-221ENST00000624204 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
PMS1-221ENST00000624204 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
PMS1-221ENST00000624204 KIRREL3Q8IZU9 778 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 JADE2Q9NQC1 790 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 MYO1AQ9UBC5 1043 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
PMS1-221ENST00000624204 ZNF185O15231 689 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 ZPR1O75312 459 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
PMS1-221ENST00000624204 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
PMS1-221ENST00000624204 TAB2Q9NYJ8 693 aa17.1■□□□□ 0.33
PMS1-221ENST00000624204 ERCC3P19447 782 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 C2orf54Q08AI8 447 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 SAFBQ15424 915 aaKnown RBP eCLIP17.09■□□□□ 0.33
PMS1-221ENST00000624204 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms