RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 IFNAR1P17181 557 aa21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 IQCA1Q86XH1 822 aa21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 CCDC82Q8N4S0 544 aa21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 SPATA32Q96LK8 384 aa21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 SCAND2PQ9GZW5 306 aaPredicted RBP21.47■■□□□ 1.03
PCDHB2-202ENST00000622947 C10orf71Q711Q0 1435 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 ZNF500O60304 480 aaPredicted RBP21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 CDKL5O76039 1030 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 PDE4BQ07343 736 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 CSPP1Q1MSJ5 1256 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 IFIT1BQ5T764 474 aaKnown RBP21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 EYA3Q99504 573 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 SLC26A6Q9BXS9 759 aa21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 TTF2Q9UNY4 1162 aaKnown RBP21.46■■□□□ 1.03
PCDHB2-202ENST00000622947 UQCRHLA0A096LP55 91 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 UQCRHP07919 91 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 TROAPQ12815 778 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 RCSD1Q6JBY9 416 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 USP28Q96RU2 1077 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 IL17RBQ9NRM6 502 aa21.45■■□□□ 1.03
PCDHB2-202ENST00000622947 FMNL1O95466 1100 aaPredicted RBP21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 SLC3A2P08195 630 aaKnown RBP21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 SCNN1DP51172 638 aa21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 RCAN1P53805 252 aa21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 CPLX2Q6PUV4 134 aaKnown RBP21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 TAOK2Q9UL54 1235 aa21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 SUGT1Q9Y2Z0 365 aa21.45■■□□□ 1.02
PCDHB2-202ENST00000622947 MYH6P13533 1939 aa21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 STK36Q9NRP7 1315 aa21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 POLR3DP05423 398 aaPredicted RBP21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 KIF23Q02241 960 aaPredicted RBP21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 PODNQ7Z5L7 613 aa21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 SLF2Q8IX21 1173 aa21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 CRACR2BQ8N4Y2 399 aaPredicted RBP21.44■■□□□ 1.02
PCDHB2-202ENST00000622947 TSPY2A6NKD2 308 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 G3V3G9 751 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 KCNA3P22001 575 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 TFAP4Q01664 338 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 DMTNQ08495 405 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 SSRP1Q08945 709 aaKnown RBP21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 DCAF8Q5TAQ9 597 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 KRT40Q6A162 431 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 BAZ2BQ9UIF8 2168 aaKnown RBP21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 C21orf2O43822 256 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 PLCG2P16885 1265 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 LIG1P18858 919 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 FUT2Q10981 343 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 AOC3Q16853 763 aa21.43■■□□□ 1.02
PCDHB2-202ENST00000622947 ECE2O60344 883 aa21.42■■□□□ 1.02
PCDHB2-202ENST00000622947 DDX4Q9NQI0 724 aaKnown RBP21.42■■□□□ 1.02
PCDHB2-202ENST00000622947 NOL7Q9UMY1 257 aaKnown RBP21.42■■□□□ 1.02
PCDHB2-202ENST00000622947 PCDHAC2Q9Y5I4 1007 aa21.42■■□□□ 1.02
PCDHB2-202ENST00000622947 PLEKHA8P1O95397 391 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 RASA1P20936 1047 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 RCOR1Q9UKL0 485 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 CFAP45Q9UL16 551 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 UTRNP46939 3433 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 USP17L3A6NCW0 530 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 USP17L4A6NCW7 530 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 WDHD1O75717 1129 aaPredicted RBP21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 DACT2Q5SW24 774 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 LRSAM1Q6UWE0 723 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 USP17L1Q7RTZ2 530 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 CATIPQ7Z7H3 387 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 SHISA4Q96DD7 197 aa21.41■■□□□ 1.02
PCDHB2-202ENST00000622947 APOBEC3HQ6NTF7 200 aaKnown RBP21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 MKNK2Q9HBH9 465 aa21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 C16orf86Q6ZW13 317 aa21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 RBSNQ9H1K0 784 aa21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 ZHX1Q9UKY1 873 aaPredicted RBP21.4■■□□□ 1.02
PCDHB2-202ENST00000622947 DPEP1P16444 411 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 CDK8P49336 464 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 PICALMQ13492 652 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 CCDC183Q5T5S1 534 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 MYSM1Q5VVJ2 828 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 KIAA0825Q8IV33 1275 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 RGS22Q8NE09 1264 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 hCG_1642624A0A1W2PR95 340 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 KIAA2012Q0VF49 1180 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 AMOTL1Q8IY63 956 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 SYAP1Q96A49 352 aaPredicted RBP21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 CLIC4Q9Y696 253 aa21.39■■□□□ 1.01
PCDHB2-202ENST00000622947 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 YDJCA8MPS7 323 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 DDAH1O94760 285 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 PDE4CQ08493 712 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 PKN1Q16512 942 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 CDC42EP5Q6NZY7 148 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 HHIPL2Q6UWX4 724 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 SLC16A10Q8TF71 515 aa21.38■■□□□ 1.01
PCDHB2-202ENST00000622947 ATL3Q6DD88 541 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 BRAPQ7Z569 592 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 TTLL6Q8N841 843 aa21.37■■□□□ 1.01
PCDHB2-202ENST00000622947 ZNF396Q96N95 335 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms