RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 SDR42E1Q8WUS8 393 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 APPBP2Q92624 585 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 FEZ1Q99689 392 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 R3HDMLQ9H3Y0 253 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 SWAP70Q9UH65 585 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 AGTPBP1Q9UPW5 1226 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 SLC4A4Q9Y6R1 1079 aa14.82□□□□□ -0.04
CBWD3-218ENST00000622755 C19orf81C9J6K1 198 aa14.81□□□□□ -0.04
CBWD3-218ENST00000622755 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
CBWD3-218ENST00000622755 GDF11O95390 407 aa14.81□□□□□ -0.04
CBWD3-218ENST00000622755 HOXD10P28358 340 aa14.81□□□□□ -0.04
CBWD3-218ENST00000622755 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
CBWD3-218ENST00000622755 ZBTB21Q9ULJ3 1066 aa14.81□□□□□ -0.04
CBWD3-218ENST00000622755 USP17L10C9JJH3 530 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
CBWD3-218ENST00000622755 RAB3GAP1Q15042 981 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 ABCB5Q2M3G0 1257 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 TSHZ3Q63HK5 1081 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 WDR18Q9BV38 432 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 DCP1AQ9NPI6 582 aaPredicted RBP14.8□□□□□ -0.04
CBWD3-218ENST00000622755 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
CBWD3-218ENST00000622755 MYH8P13535 1937 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
CBWD3-218ENST00000622755 PTPRFP10586 1907 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 GH2P01242 217 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 APPP05067 770 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 USP14P54578 494 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 HMGCS2P54868 508 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 PRMT2P55345 433 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 IRX3P78415 501 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-218ENST00000622755 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 OTOP1Q7RTM1 612 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 ZNF287Q9HBT7 754 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
CBWD3-218ENST00000622755 BACE1P56817 501 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 LACTBP83111 547 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-218ENST00000622755 MTMR2Q13614 643 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 CCDC84Q86UT8 332 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-218ENST00000622755 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 DNAJC18Q9H819 358 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 HPS5Q9UPZ3 1129 aa14.78□□□□□ -0.04
CBWD3-218ENST00000622755 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-218ENST00000622755 GCLCP48506 637 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-218ENST00000622755 TDO2P48775 406 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 PLCD1P51178 756 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 FCGRTP55899 365 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 SH3D19Q5HYK7 790 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 CCDC17Q96LX7 622 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 LNPKQ9C0E8 428 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 PUS7LQ9H0K6 701 aaKnown RBP14.77□□□□□ -0.04
CBWD3-218ENST00000622755 SH2D4AQ9H788 454 aa14.77□□□□□ -0.04
CBWD3-218ENST00000622755 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-218ENST00000622755 DDX60LQ5H9U9 1706 aaKnown RBP14.77□□□□□ -0.05
CBWD3-218ENST00000622755 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
CBWD3-218ENST00000622755 CYP2C8P10632 490 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 PDE1AP54750 535 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 C17orf99Q6UX52 265 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 GTF3C2Q8WUA4 911 aaPredicted RBP14.76□□□□□ -0.05
CBWD3-218ENST00000622755 PTPN22Q9Y2R2 807 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 LOC285556D6RIA3 1793 aa14.76□□□□□ -0.05
CBWD3-218ENST00000622755 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
CBWD3-218ENST00000622755 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 USP17L21D6R901 530 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 GPAA1O43292 621 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 PRKAB2O43741 272 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 PSMC4P43686 418 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 MOGSQ13724 837 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 CHD1LQ86WJ1 897 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 TICAM2Q86XR7 235 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
CBWD3-218ENST00000622755 STRBPQ96SI9 672 aaKnown RBP14.75□□□□□ -0.05
CBWD3-218ENST00000622755 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 ARHGEF10LQ9HCE6 1279 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 SHMT1P34896 483 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 RRP1BQ14684 758 aaKnown RBP14.75□□□□□ -0.05
CBWD3-218ENST00000622755 SLFNL1Q499Z3 407 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 SLC9C1Q4G0N8 1177 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
CBWD3-218ENST00000622755 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-218ENST00000622755 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
CBWD3-218ENST00000622755 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
CBWD3-218ENST00000622755 GABPAQ06546 454 aa14.74□□□□□ -0.05
CBWD3-218ENST00000622755 ZYXQ15942 572 aaKnown RBP14.74□□□□□ -0.05
CBWD3-218ENST00000622755 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
CBWD3-218ENST00000622755 RAET1EQ8TD07 263 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms