RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NLRP12P59046 1061 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 RESTQ13127 1097 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 PTPN21Q16825 1174 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 OR8K1Q8NGG5 319 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 DPF2Q92785 391 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 BRF1Q92994 677 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 ACTR5Q9H9F9 607 aaPredicted RBP8.91□□□□□ -0.98
VPS11-209ENST00000622309 FANCLQ9NW38 375 aa8.91□□□□□ -0.98
VPS11-209ENST00000622309 TPX2Q9ULW0 747 aaKnown RBP8.91□□□□□ -0.98
VPS11-209ENST00000622309 CHD2O14647 1828 aaKnown RBP8.91□□□□□ -0.98
VPS11-209ENST00000622309 OPA1O60313 960 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 PSMA5P28066 241 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 PDCLQ13371 301 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 DRP2Q13474 957 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 TMEM139Q8IV31 216 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 NOA1Q8NC60 698 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 PHC3Q8NDX5 983 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 ZNF396Q96N95 335 aaPredicted RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 OSBPL9Q96SU4 736 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 HOOK1Q9UJC3 728 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 RCOR1Q9UKL0 485 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 ADCY9O60503 1353 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 ADKP55263 362 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 C16orf87Q6PH81 154 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 FUKQ8N0W3 1084 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 EZH1Q92800 747 aaPredicted RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 CCDC47Q96A33 483 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 TBC1D31Q96DN5 1066 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 NGLY1Q96IV0 654 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 MRPL44Q9H9J2 332 aaKnown RBP8.9□□□□□ -0.98
VPS11-209ENST00000622309 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
VPS11-209ENST00000622309 IKBKBO14920 756 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 CREB3O43889 395 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 GNAI2P04899 355 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 MAGEA8P43361 318 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 NFE2L2Q16236 605 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 INF2Q27J81 1249 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 TTLL7Q6ZT98 887 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 ENGASEQ8NFI3 743 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 TRIM58Q8NG06 486 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 B4GALNT2Q8NHY0 566 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 PMM1Q92871 262 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 GPATCH3Q96I76 525 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 NAPGQ99747 312 aaPredicted RBP8.9□□□□□ -0.99
VPS11-209ENST00000622309 TRAIPQ9BWF2 469 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 ZNF232Q9UNY5 417 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 TRPC6Q9Y210 931 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 ACEP12821 1306 aa8.9□□□□□ -0.99
VPS11-209ENST00000622309 KIAA0232Q92628 1395 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 TMEM232C9JQI7 657 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 AHCYL1O43865 530 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 CA8P35219 290 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 AMPHP49418 695 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NCAPHQ15003 741 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NSMCE1Q8WV22 266 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 SLC39A2Q9NP94 309 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 AOX1Q06278 1338 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 USP32Q8NFA0 1604 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 MYO1EQ12965 1108 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 BRAPQ7Z569 592 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 IL1RAPL2Q9NP60 686 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 DCCP43146 1447 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 A0A1B0GVL5 298 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 MYL5Q02045 173 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NAA35Q5VZE5 725 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 BLOC1S2Q6QNY1 142 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 BZW1Q7L1Q6 419 aaKnown RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 SPATA21Q7Z572 469 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 FAM228AQ86W67 206 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 MFN1Q8IWA4 741 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 SLC35F6Q8N357 371 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 NGDNQ8NEJ9 315 aaKnown RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 ATRIPQ8WXE1 791 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 HAUS2Q9NVX0 235 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 RGL1Q9NZL6 768 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 LMCD1Q9NZU5 365 aa8.89□□□□□ -0.99
VPS11-209ENST00000622309 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
VPS11-209ENST00000622309 TFRCP02786 760 aaKnown RBP8.88□□□□□ -0.99
VPS11-209ENST00000622309 ATP5JP18859 108 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 ABL2P42684 1182 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 PAPOLAP51003 745 aaKnown RBP8.88□□□□□ -0.99
VPS11-209ENST00000622309 USP14P54578 494 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 SPECC1Q5M775 1068 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 MIS18BP1Q6P0N0 1132 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 RASSF8Q8NHQ8 419 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 SH3GL2Q99962 352 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 SELENOOQ9BVL4 669 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 FTOQ9C0B1 505 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS11-209ENST00000622309 QTRT2Q9H974 415 aaKnown RBP8.88□□□□□ -0.99
VPS11-209ENST00000622309 BAIAP2L1Q9UHR4 511 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 COL3A1P02461 1466 aaPredicted RBP8.88□□□□□ -0.99
VPS11-209ENST00000622309 ERICH2A1L162 156 aa8.88□□□□□ -0.99
VPS11-209ENST00000622309 AGPSO00116 658 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms