RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SERPINB13Q9UIV8 391 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 DDX60LQ5H9U9 1706 aaKnown RBP21.72■■□□□ 1.07
SCAMP4-213ENST00000621748 LOC285556D6RIA3 1793 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 NAV1Q8NEY1 1877 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 EVX2Q03828 476 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 SH3D19Q5HYK7 790 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 TSHZ3Q63HK5 1081 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 TATDN1Q6P1N9 297 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 SDR42E1Q8WUS8 393 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 ARMC5Q96C12 935 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 TNRC18O15417 2968 aaPredicted RBP21.71■■□□□ 1.07
SCAMP4-213ENST00000621748 GNRH1P01148 92 aa21.7■■□□□ 1.06
SCAMP4-213ENST00000621748 BACE1P56817 501 aa21.7■■□□□ 1.06
SCAMP4-213ENST00000621748 MTMR2Q13614 643 aa21.7■■□□□ 1.06
SCAMP4-213ENST00000621748 MCM9Q9NXL9 1143 aa21.7■■□□□ 1.06
SCAMP4-213ENST00000621748 MGAMO43451 1857 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 BRCA2P51587 3418 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 PRKAB2O43741 272 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 MBD4O95243 580 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 FMNL1O95466 1100 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 GH2P01242 217 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 POLR3DP05423 398 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 UBE3CQ15386 1083 aa21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 SMCR8Q8TEV9 937 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 DCP1AQ9NPI6 582 aaPredicted RBP21.69■■□□□ 1.06
SCAMP4-213ENST00000621748 OSBPP22059 807 aa21.68■■□□□ 1.06
SCAMP4-213ENST00000621748 SHMT1P34896 483 aa21.68■■□□□ 1.06
SCAMP4-213ENST00000621748 GABPAQ06546 454 aa21.68■■□□□ 1.06
SCAMP4-213ENST00000621748 DOCK3Q8IZD9 2030 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 BAZ2AQ9UIF9 1905 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 USP17L10C9JJH3 530 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 NEFLP07196 543 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 PRMT2P55345 433 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 CERKLQ49MI3 558 aaPredicted RBP21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 SLC9C1Q4G0N8 1177 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 GPATCH3Q96I76 525 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 SRRDQ9UH36 339 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 PNMA3Q9UL41 463 aa21.67■■□□□ 1.06
SCAMP4-213ENST00000621748 C19orf81C9J6K1 198 aa21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 CYP2D6P10635 497 aa21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 ZSCAN25Q6NSZ9 544 aa21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 OTUD7AQ8TE49 926 aaPredicted RBP21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 ZNF333Q96JL9 665 aa21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 PUS7LQ9H0K6 701 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
SCAMP4-213ENST00000621748 POTEFA5A3E0 1075 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 FCGRTP55899 365 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 NBPF11Q86T75 865 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 ANKRD13CQ8N6S4 541 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 KBTBD3Q8NAB2 608 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 SH3TC2Q8TF17 1288 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 TMOD4Q9NZQ9 345 aa21.65■■□□□ 1.06
SCAMP4-213ENST00000621748 HOXD10P28358 340 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 RAB3GAP1Q15042 981 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 ABCB5Q2M3G0 1257 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 EMILIN3Q9NT22 766 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 ATP8A2Q9NTI2 1148 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 PDE4DIPQ5VU43 2346 aa21.64■■□□□ 1.05
SCAMP4-213ENST00000621748 MYPNQ86TC9 1320 aa21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 HOXA7P31268 230 aaPredicted RBP21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 GUCY1A2P33402 732 aa21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 SLC44A5Q8NCS7 719 aa21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 GABRQQ9UN88 632 aa21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 MKI67P46013 3256 aaKnown RBP21.63■■□□□ 1.05
SCAMP4-213ENST00000621748 TTC41PQ6P2S7 1318 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 RBBP6Q7Z6E9 1792 aaKnown RBP21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 GCLCP48506 637 aaPredicted RBP21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 PRKCZQ05513 592 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 FAM110CQ1W6H9 321 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 PI4K2BQ8TCG2 481 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 RAET1EQ8TD07 263 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 ACER1Q8TDN7 264 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 DYNLL2Q96FJ2 89 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 P2RX7Q99572 595 aaKnown RBP21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 CABP5Q9NP86 173 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 SLC4A4Q9Y6R1 1079 aa21.62■■□□□ 1.05
SCAMP4-213ENST00000621748 CYP2D7A0A087X1C5 515 aa21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 MYCP01106 439 aaPredicted RBP21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 USP17L2Q6R6M4 530 aa21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 OSBP2Q969R2 916 aa21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 STRBPQ96SI9 672 aaKnown RBP21.61■■□□□ 1.05
SCAMP4-213ENST00000621748 USP17L12C9JPN9 530 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 USP17L21D6R901 530 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 RNF113AO15541 343 aaKnown RBP21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 IRX3P78415 501 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 SEPT2Q15019 361 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 ZYXQ15942 572 aaKnown RBP21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 C12orf60Q5U649 245 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 MYH8P13535 1937 aa21.6■■□□□ 1.05
SCAMP4-213ENST00000621748 TNPO2O14787 897 aaKnown RBP21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 PEX10O60683 326 aa21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 EN2P19622 333 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-213ENST00000621748 GRK4P32298 578 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms