RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 BTBD18B2RXH4 712 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 KIF2AO00139 706 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 IFIT3O14879 490 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 ADAMTS3O15072 1205 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 RGL2O15211 777 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ORC4O43929 436 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 TADA3O75528 432 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PLEKHA8P1O95397 391 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 DEXIO95424 95 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 H2AFXP16104 143 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 GNAT2P19087 354 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 FECHP22830 423 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 LMOD1P29536 600 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 EVA1CP58658 441 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 CHRNDQ07001 517 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PPARAQ07869 468 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 SSRP1Q08945 709 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 GOLGA8FQ08AF8 430 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 GOLGA8DPQ0D2H9 430 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 MAP3K12Q12852 859 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 DPYDQ12882 1025 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 TRDNQ13061 729 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 CHAF1AQ13111 956 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 NR5A1Q13285 461 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 CUL4BQ13620 913 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 SF3B3Q15393 1217 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 E2F4Q16254 413 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ZNF827Q17R98 1081 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 SLC35G1Q2M3R5 365 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 LONRF3Q496Y0 759 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 KMT5BQ4FZB7 885 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PPP4R3BQ5MIZ7 849 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 CDKAL1Q5VV42 579 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 FBXO38Q6PIJ6 1188 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 SYNE3Q6ZMZ3 975 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 USP49Q70CQ1 688 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 FILIP1Q7Z7B0 1213 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 FCHSD1Q86WN1 690 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 GRAMD1CQ8IYS0 662 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ENAHQ8N8S7 591 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 JMYQ8N9B5 988 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 KRI1Q8N9T8 703 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 TC2NQ8N9U0 490 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ZNF579Q8NAF0 562 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 LINC00116Q8NCU8 138 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 CCDC112Q8NEF3 446 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ZNF397Q8NF99 534 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 KIF18AQ8NI77 898 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ERO1AQ96HE7 468 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 SDF4Q9BRK5 362 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PHF20Q9BVI0 1012 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 UTP14AQ9BVJ6 771 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 BRIP1Q9BX63 1249 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 RNF26Q9BY78 433 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 KRT23Q9C075 422 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 NAT10Q9H0A0 1025 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 FOXP1Q9H334 677 aaPredicted RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 CNNM2Q9H8M5 875 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ZNF446Q9NWS9 450 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 AATFQ9NY61 560 aaKnown RBP eCLIP3.72□□□□□ -1.81
U1.39-201ENST00000621562 SERTAD1Q9UHV2 236 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 DDX41Q9UJV9 622 aaKnown RBP3.72□□□□□ -1.81
U1.39-201ENST00000621562 KCNH3Q9ULD8 1083 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PAXBP1Q9Y5B6 917 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 PCDHA5Q9Y5H7 936 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 ARID2Q68CP9 1835 aa3.72□□□□□ -1.81
U1.39-201ENST00000621562 TNKSO95271 1327 aa3.71□□□□□ -1.81
U1.39-201ENST00000621562 XDHP47989 1333 aa3.71□□□□□ -1.81
U1.39-201ENST00000621562 FAM205AQ6ZU69 1335 aa3.71□□□□□ -1.81
U1.39-201ENST00000621562 CNTNAP4Q9C0A0 1308 aa3.71□□□□□ -1.81
U1.39-201ENST00000621562 C10orf71Q711Q0 1435 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 LOC102724428A0A0B4J2F2 783 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 A0A1B0GTH6 734 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 EXOC5O00471 708 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 CBFA2T2O43439 604 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 DDAH1O94760 285 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 SMC2O95347 1197 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 CD44P16070 742 aaKnown RBP3.71□□□□□ -1.82
U1.39-201ENST00000621562 CYP7A1P22680 504 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 SFPQP23246 707 aaKnown RBP eCLIP3.71□□□□□ -1.82
U1.39-201ENST00000621562 KLRK1P26718 216 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 PLCD1P51178 756 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 SIK1P57059 783 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 DYNLL1P63167 89 aaKnown RBP3.71□□□□□ -1.82
U1.39-201ENST00000621562 ATP2C1P98194 919 aaPredicted RBP3.71□□□□□ -1.82
U1.39-201ENST00000621562 TROAPQ12815 778 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 UBE4AQ14139 1066 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 DHX8Q14562 1220 aaKnown RBP3.71□□□□□ -1.82
U1.39-201ENST00000621562 WTAPQ15007 396 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 POSTNQ15063 836 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 ELF2Q15723 593 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 PTPN21Q16825 1174 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 ERFEQ4G0M1 354 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 CCDC152Q4G0S7 254 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 RILPL1Q5EBL4 403 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 SPECC1Q5M775 1068 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 SLC10A5Q5PT55 438 aa3.71□□□□□ -1.82
U1.39-201ENST00000621562 RCSD1Q6JBY9 416 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms