RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 NBPF11Q86T75 865 aa32.33■■■□□ 2.77
FMR1-219ENST00000621453 TFAP4Q01664 338 aa32.32■■■□□ 2.76
FMR1-219ENST00000621453 KIF23Q02241 960 aaPredicted RBP32.32■■■□□ 2.76
FMR1-219ENST00000621453 KRT40Q6A162 431 aa32.32■■■□□ 2.76
FMR1-219ENST00000621453 CRACR2BQ8N4Y2 399 aaPredicted RBP32.32■■■□□ 2.76
FMR1-219ENST00000621453 GOLGA6L4A6NEF3 574 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 TROAPQ12815 778 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 USP28Q96RU2 1077 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 RBM28Q9NW13 759 aaKnown RBP32.31■■■□□ 2.76
FMR1-219ENST00000621453 MYH6P13533 1939 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 SCN9AQ15858 1988 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 ECE2O60344 883 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 ZNF287Q9HBT7 754 aa32.31■■■□□ 2.76
FMR1-219ENST00000621453 FKBP1AP62942 108 aaKnown RBP32.3■■■□□ 2.76
FMR1-219ENST00000621453 CEBPZQ03701 1054 aaKnown RBP32.3■■■□□ 2.76
FMR1-219ENST00000621453 TRIM29Q14134 588 aa32.3■■■□□ 2.76
FMR1-219ENST00000621453 STRIP1Q5VSL9 837 aa32.3■■■□□ 2.76
FMR1-219ENST00000621453 KCNQ5Q9NR82 932 aa32.3■■■□□ 2.76
FMR1-219ENST00000621453 RCOR1Q9UKL0 485 aa32.3■■■□□ 2.76
FMR1-219ENST00000621453 ZNF646O15015 1829 aaPredicted RBP32.3■■■□□ 2.76
FMR1-219ENST00000621453 DEXIO95424 95 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 HHIPL2Q6UWX4 724 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 ZNF444Q8N0Y2 327 aaPredicted RBP32.29■■■□□ 2.76
FMR1-219ENST00000621453 CMTR1Q8N1G2 835 aaKnown RBP32.29■■■□□ 2.76
FMR1-219ENST00000621453 CCDC82Q8N4S0 544 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 SUPT20HQ8NEM7 779 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 UBE2Q2LH0YL09 131 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 C16orf86Q6ZW13 317 aa32.29■■■□□ 2.76
FMR1-219ENST00000621453 FTOQ9C0B1 505 aaKnown RBP eCLIP32.29■■■□□ 2.763e-6■□□□□ 8.5
FMR1-219ENST00000621453 ADAMTSL1Q8N6G6 1762 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 KIF28PB7ZC32 967 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 SCNN1DP51172 638 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 CCDC178Q5BJE1 867 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 SLC44A5Q8NCS7 719 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 TEKT1Q969V4 418 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 PGBD1Q96JS3 809 aa32.28■■■□□ 2.76
FMR1-219ENST00000621453 GUCY1A2P33402 732 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 KIAA2012Q0VF49 1180 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 AOC3Q16853 763 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 MYSM1Q5VVJ2 828 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 RCSD1Q6JBY9 416 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 DGKHQ86XP1 1220 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 RNF26Q9BY78 433 aaPredicted RBP32.27■■■□□ 2.76
FMR1-219ENST00000621453 C21orf2O43822 256 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 TSPY3P0CV98 308 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 TSPY8P0CW00 308 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 TTLL6Q8N841 843 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 IL17RBQ9NRM6 502 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 TCP11L1Q9NUJ3 509 aa32.27■■■□□ 2.76
FMR1-219ENST00000621453 LETM1O95202 739 aaPredicted RBP32.26■■■□□ 2.75
FMR1-219ENST00000621453 RASA1P20936 1047 aa32.26■■■□□ 2.75
FMR1-219ENST00000621453 CDK8P49336 464 aa32.26■■■□□ 2.75
FMR1-219ENST00000621453 DACT2Q5SW24 774 aa32.26■■■□□ 2.75
FMR1-219ENST00000621453 GRIPAP1Q4V328 841 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 ANKS1AQ92625 1134 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 TAOK2Q9UL54 1235 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 KIF13BQ9NQT8 1826 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 PICALMQ13492 652 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 CCDC125Q86Z20 511 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 CTCFLQ8NI51 663 aaPredicted RBP32.25■■■□□ 2.75
FMR1-219ENST00000621453 USP40Q9NVE5 1235 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 RTEL1Q9NZ71 1219 aa32.25■■■□□ 2.75
FMR1-219ENST00000621453 USP17L3A6NCW0 530 aa32.24■■■□□ 2.75
FMR1-219ENST00000621453 USP17L4A6NCW7 530 aa32.24■■■□□ 2.75
FMR1-219ENST00000621453 USP17L1Q7RTZ2 530 aa32.24■■■□□ 2.75
FMR1-219ENST00000621453 WDHD1O75717 1129 aaPredicted RBP32.23■■■□□ 2.75
FMR1-219ENST00000621453 LIG1P18858 919 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 CRKP46108 304 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 AKAP17AQ02040 695 aaKnown RBP32.23■■■□□ 2.75
FMR1-219ENST00000621453 FUT2Q10981 343 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 MRIQ9BWK5 157 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 KAT14Q9H8E8 782 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 PLEKHA8P1O95397 391 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 GNL2Q13823 731 aaKnown RBP32.23■■■□□ 2.75
FMR1-219ENST00000621453 APOBEC3HQ6NTF7 200 aaKnown RBP32.23■■■□□ 2.75
FMR1-219ENST00000621453 TMTC3Q6ZXV5 915 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 BICD2Q8TD16 824 aa32.23■■■□□ 2.75
FMR1-219ENST00000621453 U2AF2P26368 475 aaKnown RBP eCLIP32.22■■■□□ 2.752e-7■■■■□ 20.4
FMR1-219ENST00000621453 CCDC93Q567U6 631 aa32.22■■■□□ 2.75
FMR1-219ENST00000621453 KIAA0825Q8IV33 1275 aa32.22■■■□□ 2.75
FMR1-219ENST00000621453 POLR3EQ9NVU0 708 aa32.22■■■□□ 2.75
FMR1-219ENST00000621453 PPIP5K2O43314 1243 aa32.21■■■□□ 2.75
FMR1-219ENST00000621453 PRPF3O43395 683 aaKnown RBP32.21■■■□□ 2.75
FMR1-219ENST00000621453 DPEP1P16444 411 aa32.21■■■□□ 2.75
FMR1-219ENST00000621453 CDC42EP5Q6NZY7 148 aa32.21■■■□□ 2.75
FMR1-219ENST00000621453 PANK2Q9BZ23 570 aa32.21■■■□□ 2.75
FMR1-219ENST00000621453 DDX4Q9NQI0 724 aaKnown RBP32.21■■■□□ 2.75
FMR1-219ENST00000621453 MMP1P03956 469 aa32.2■■■□□ 2.75
FMR1-219ENST00000621453 KCNA3P22001 575 aa32.2■■■□□ 2.75
FMR1-219ENST00000621453 ZDHHC15Q96MV8 337 aa32.2■■■□□ 2.75
FMR1-219ENST00000621453 PNMA1Q8ND90 353 aa32.2■■■□□ 2.74
FMR1-219ENST00000621453 YEATS4O95619 227 aa32.19■■■□□ 2.74
FMR1-219ENST00000621453 HDLBPQ00341 1268 aaKnown RBP32.19■■■□□ 2.74
FMR1-219ENST00000621453 SAFBQ15424 915 aaKnown RBP eCLIP32.19■■■□□ 2.74
FMR1-219ENST00000621453 RTKN2Q8IZC4 609 aa32.19■■■□□ 2.74
FMR1-219ENST00000621453 LINC00301Q8NCQ3 95 aa32.19■■■□□ 2.74
FMR1-219ENST00000621453 MAP3K14Q99558 947 aa32.19■■■□□ 2.74
FMR1-219ENST00000621453 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.19■■■□□ 2.74
FMR1-219ENST00000621453 CLIC4Q9Y696 253 aa32.19■■■□□ 2.74
FMR1-219ENST00000621453 NASPP49321 788 aaPredicted RBP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms