RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 UBAC1Q9BSL1 405 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 DEF6Q9H4E7 631 aa7.89□□□□□ -1.15
NEDD9-216ENST00000620854 ZNHIT6Q9NWK9 470 aaKnown RBP7.89□□□□□ -1.15
NEDD9-216ENST00000620854 CCDC151A5D8V7 595 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ZBTB43O43298 467 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SSBP05455 408 aaKnown RBP eCLIP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TMEM67Q5HYA8 995 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ZFYVE27Q5T4F4 411 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TTC19Q6DKK2 380 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SRGAP1Q7Z6B7 1085 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 RPGRQ92834 1020 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 NACAP1Q9BZK3 213 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TANGO6Q9C0B7 1094 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ANKZF1Q9H8Y5 726 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CABP5Q9NP86 173 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 LRP2BPQ9P2M1 347 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TRIM10Q9UDY6 481 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 PCDHB6Q9Y5E3 794 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 PXDNQ92626 1479 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 EYA2O00167 538 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 IFIT3O14879 490 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SRGAP2O75044 1071 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CTDSPL2Q05D32 466 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CAVIN4Q5BKX8 364 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CT47A1Q5JQC4 288 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 MB21D2Q8IYB1 491 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 DIS3L2Q8IYB7 885 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 GSPT2Q8IYD1 628 aaKnown RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 HELBQ8NG08 1087 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 PLBD2Q8NHP8 589 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 AIDAQ96BJ3 306 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 NUP88Q99567 741 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 POLD4Q9HCU8 107 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 HDAC6Q9UBN7 1215 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CTAGE9A4FU28 777 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SNAP23O00161 211 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 FOXP2O15409 715 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 IL15P40933 162 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 DNA2P51530 1060 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 GTF2A1P52655 376 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 PTPAQ15257 358 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CCDC152Q4G0S7 254 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 BEND6Q5SZJ8 279 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 GPATCH11Q8N954 259 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 EXOC4Q96A65 974 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 EPSTI1Q96J88 318 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CDK5RAP3Q96JB5 506 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 MED15Q96RN5 788 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 FAM204AQ9H8W3 233 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CCNL1Q9UK58 526 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ADGRG1Q9Y653 693 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 RGPD1P0DJD0 1748 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ERLIN1O75477 346 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SLC5A1P13866 664 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 KCNJ6P48051 423 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CASP8Q14790 479 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 RESP18Q5W5W9 173 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 APOA5Q6Q788 366 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 TBC1D10CQ8IV04 446 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 BLZF1Q9H2G9 400 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 ANKIB1Q9P2G1 1089 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 CDC23Q9UJX2 597 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 SLC12A7Q9Y666 1083 aa7.88□□□□□ -1.15
NEDD9-216ENST00000620854 KDM4FA0A1W2PPD8 638 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CTAGE15A4D2H0 777 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 GOLGA6L9A6NEM1 432 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 FAM205CA6NFA0 338 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 N4BP3O15049 544 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CTAGE8P0CG41 777 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 FOXO4P98177 505 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 DIP2AQ14689 1571 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CTAGE6Q86UF2 777 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CTAGE4Q8IX94 777 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 NLRP3Q96P20 1036 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 FBXO3Q9UK99 471 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 AKAP12Q02952 1782 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 GNPATO15228 680 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 EIF3JO75822 258 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CDKL5O76039 1030 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 IBSPP21815 317 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 FXR1P51114 621 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 OXER1Q8TDS5 423 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 HPSEQ9Y251 543 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 JCADQ9P266 1359 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 NRXN3Q9Y4C0 1643 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 LRRIQ3A6PVS8 624 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 RANBP6O60518 1105 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 EIF5P55010 431 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 SSRP1Q08945 709 aaKnown RBP7.87□□□□□ -1.15
NEDD9-216ENST00000620854 MUM1L1Q5H9M0 696 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 CCDC181Q5TID7 509 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 DACH1Q9UI36 760 aa7.87□□□□□ -1.15
NEDD9-216ENST00000620854 TRPC5Q9UL62 973 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms