RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 CHRNA4P43681 627 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 SOX9P48436 509 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 MCF2L2Q86YR7 1114 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 REXO1Q8N1G1 1221 aaKnown RBP6.4□□□□□ -1.38
SEM1-220ENST00000619259 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
SEM1-220ENST00000619259 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
SEM1-220ENST00000619259 GMLQ99445 158 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 YIPF2Q9BWQ6 316 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
SEM1-220ENST00000619259 WNT10AQ9GZT5 417 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 REV1Q9UBZ9 1251 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 KLHL3Q9UH77 587 aa6.4□□□□□ -1.38
SEM1-220ENST00000619259 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
SEM1-220ENST00000619259 BMP3P12645 472 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
SEM1-220ENST00000619259 ZBTB37Q5TC79 503 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 CD163Q86VB7 1156 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
SEM1-220ENST00000619259 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
SEM1-220ENST00000619259 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 MEGF10Q96KG7 1140 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
SEM1-220ENST00000619259 FGRP09769 529 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 GATA4P43694 442 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 RASSF7Q02833 373 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 RING1Q06587 406 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 NFKBIBQ15653 356 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 SGO2Q562F6 1265 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 HID1Q8IV36 788 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 KCT2Q8NC54 265 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 ISL2Q96A47 359 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 PCOLCE2Q9UKZ9 415 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 R3HCC1Q9Y3T6 440 aaKnown RBP6.38□□□□□ -1.39
SEM1-220ENST00000619259 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 IFT140Q96RY7 1462 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 FYCO1Q9BQS8 1478 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 TIAM1Q13009 1591 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 SAMD9Q5K651 1589 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 CTTNBP2Q8WZ74 1663 aa6.38□□□□□ -1.39
SEM1-220ENST00000619259 CASKIN1Q8WXD9 1431 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.37□□□□□ -1.39
SEM1-220ENST00000619259 NEFMP07197 916 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 NFICP08651 508 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 IMPDH2P12268 514 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 LRRFIP1Q32MZ4 808 aaKnown RBP6.37□□□□□ -1.39
SEM1-220ENST00000619259 Q6ZS46 218 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 FAM13CQ8NE31 585 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 FAM46AQ96IP4 442 aaKnown RBP6.37□□□□□ -1.39
SEM1-220ENST00000619259 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
SEM1-220ENST00000619259 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 ADAMTS12P58397 1594 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 GRIN2BQ13224 1484 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 FMN1Q68DA7 1419 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 TDRD9Q8NDG6 1382 aaKnown RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 ATE1O95260 518 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 GDF11O95390 407 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 MAP4P27816 1152 aaKnown RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 PPP2R5EQ16537 467 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 UVSSAQ2YD98 709 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 PMFBP1Q8TBY8 1022 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 XAGE3Q8WTP9 111 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 TMEM87BQ96K49 555 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 MYRFLQ96LU7 910 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 DNAJC2Q99543 621 aaKnown RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 DPH2Q9BQC3 489 aaPredicted RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
SEM1-220ENST00000619259 ANTXR1Q9H6X2 564 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 FBRSQ9HAH7 460 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 TJP2Q9UDY2 1190 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 ZNRF3Q9ULT6 936 aa6.36□□□□□ -1.39
SEM1-220ENST00000619259 LRRC9Q6ZRR7 1453 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 PRR36Q9H6K5 1346 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 CLSPNQ9HAW4 1339 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 FAM95CA0A1B0GW59 222 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 IGSF3O75054 1194 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 ETFBP38117 255 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 YARSP54577 528 aaKnown RBP6.35□□□□□ -1.39
SEM1-220ENST00000619259 CHMP4BP1P59074 171 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 MAP7Q14244 749 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 NKG7Q16617 165 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 ARSHQ5FYA8 562 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 SLC6A19Q695T7 634 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 PAOXQ6QHF9 649 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 UBE3DQ7Z6J8 389 aa6.35□□□□□ -1.39
SEM1-220ENST00000619259 MCATQ8IVS2 390 aaKnown RBP6.35□□□□□ -1.39
SEM1-220ENST00000619259 DZIP1LQ8IYY4 767 aaKnown RBP6.35□□□□□ -1.39
SEM1-220ENST00000619259 PHACTR4Q8IZ21 702 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms