RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PDE11AQ9HCR9 933 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 FANCLQ9NW38 375 aa3.41□□□□□ -1.86
LPP-221ENST00000618621 PLEKHG3A1L390 1219 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 CTIFO43310 598 aaKnown RBP3.4□□□□□ -1.86
LPP-221ENST00000618621 TAF5LO75529 589 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 ATP2A2P16615 1042 aaKnown RBP3.4□□□□□ -1.86
LPP-221ENST00000618621 ATP6V1AP38606 617 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 MCM9Q9NXL9 1143 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 RRAGAQ7L523 313 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 CEP83Q9Y592 693 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 CTNNA2P26232 953 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 MCM7P33993 719 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 PARD6BQ9BYG5 372 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 NFE2L3Q9Y4A8 694 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 SLC20A2Q08357 652 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 SLC9C1Q4G0N8 1177 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 PRPF38AQ8NAV1 312 aaKnown RBP3.4□□□□□ -1.86
LPP-221ENST00000618621 PCP11498 1178 aaKnown RBP3.4□□□□□ -1.86
LPP-221ENST00000618621 LIN9Q5TKA1 542 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 ARHGAP27Q6ZUM4 889 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 CRACR2BQ8N4Y2 399 aaPredicted RBP3.4□□□□□ -1.86
LPP-221ENST00000618621 MAP4K1Q92918 833 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 PGBD1Q96JS3 809 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 STIM2Q9P246 746 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 TRAF5O00463 557 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 PCK1P35558 622 aa3.4□□□□□ -1.86
LPP-221ENST00000618621 RFC4P35249 363 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 DDB1Q16531 1140 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 PPP1R13BQ96KQ4 1090 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 TUBB6Q9BUF5 446 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 MSH6P52701 1360 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 LOC102724159A0A0B4J2E5 919 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 KRT9P35527 623 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 PWP2Q15269 919 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 TPTE2Q6XPS3 522 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 LMNTD2Q8IXW0 634 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 ZBTB9Q96C00 473 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 RAB3IPQ96QF0 476 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 PANX2Q96RD6 677 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 SLFN14P0C7P3 912 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 CCDC97Q96F63 343 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 DENND2AQ9ULE3 1009 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 EXOC7Q9UPT5 735 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 C6orf229H3BNL8 230 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 ERCC5P28715 1186 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 GBP6Q6ZN66 633 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 RPGRIP1Q96KN7 1286 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 ZCCHC17Q9NP64 241 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 MED4Q9NPJ6 270 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 PCDHA7Q9UN72 937 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 THOC2Q8NI27 1593 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 ZMYM4Q5VZL5 1548 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 TMEM110-MUSTN1A8MSY1 372 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 CALUO43852 315 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 PLCB3Q01970 1234 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 ARMCX6Q7L4S7 300 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 PBKQ96KB5 322 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 IQSEC3Q9UPP2 1182 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 PPP2R2CQ9Y2T4 447 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 MACROD2A1Z1Q3 448 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 FBXO38Q6PIJ6 1188 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 EPN1Q9Y6I3 576 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 NDUFAB1O14561 156 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 OAS2P29728 719 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 SMTNP53814 917 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 ADKP55263 362 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 TCIRG1Q13488 830 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 NAA30Q147X3 362 aaPredicted RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 SMYD5Q6GMV2 418 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 TRIML1Q8N9V2 468 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 KIFC2Q96AC6 838 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 SEC62Q99442 399 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 RNF14Q9UBS8 474 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 PARP2Q9UGN5 583 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 CTNND2Q9UQB3 1225 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 YEATS2Q9ULM3 1422 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 BAZ2BQ9UIF8 2168 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 A0A087WWV3 80 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 A0A1B0GUA9 196 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 GCKRQ14397 625 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 KMT5BQ4FZB7 885 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 BICD1Q96G01 975 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 TSNARE1Q96NA8 513 aa3.4□□□□□ -1.87
LPP-221ENST00000618621 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
LPP-221ENST00000618621 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.4□□□□□ -1.87
LPP-221ENST00000618621 PCF11O94913 1555 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 NAPAP54920 295 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 MORC3Q14149 939 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 C11orf57Q6ZUT1 292 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 CFAP57Q96MR6 1250 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 TRAIPQ9BWF2 469 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CDC23Q9UJX2 597 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 BZW2Q9Y6E2 419 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 FAM135AQ9P2D6 1515 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 NEURL1BA8MQ27 555 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 APBA1Q02410 837 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 HSP90AA4PQ58FG1 418 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 WDR78Q5VTH9 848 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 XAGE2Q96GT9 111 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms