RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 PDE6AP16499 860 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 ERVK-24P63145 666 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 IRF2BP1Q8IU81 584 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 GREM2Q9H772 168 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 NFE2L3Q9Y4A8 694 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 ZNF532Q9HCE3 1301 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 B4E1Z4 1266 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 PLCD1P51178 756 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 HLFQ16534 295 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 ZBTB3Q9H5J0 574 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 AATFQ9NY61 560 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD7-212ENST00000618450 PNPLA7Q6ZV29 1317 aa9.09□□□□□ -0.95
CHD7-212ENST00000618450 RASSF10A6NK89 507 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 PPP2R3AQ06190 1150 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 SPECC1Q5M775 1068 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 NLRP10Q86W26 655 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 PHF20Q9BVI0 1012 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 ANAPC4Q9UJX5 808 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
CHD7-212ENST00000618450 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 SEMA3EO15041 775 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 NPHP1O15259 732 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 PDE8BO95263 885 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 FXR1P51114 621 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHD7-212ENST00000618450 SMC1AQ14683 1233 aaKnown RBP9.08□□□□□ -0.96
CHD7-212ENST00000618450 TTC39AQ5SRH9 613 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 MYL10Q9BUA6 226 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 PATL2C9JE40 543 aaKnown RBP9.08□□□□□ -0.96
CHD7-212ENST00000618450 ZSCAN12O43309 604 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 NR5A1Q13285 461 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 LONRF2Q1L5Z9 754 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 C4orf32Q8N8J7 132 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 ZNF384Q8TF68 577 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 ADAM21Q9UKJ8 722 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 BCL9O00512 1426 aa9.08□□□□□ -0.96
CHD7-212ENST00000618450 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 PRPF6O94906 941 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 TPM1P09493 284 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 TOP1P11387 765 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 PHKA1P46020 1223 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 RBL2Q08999 1139 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 SYNE3Q6ZMZ3 975 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 ZNF662Q6ZS27 426 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 SRGAP1Q7Z6B7 1085 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 DESI2Q9BSY9 194 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 RAI14Q9P0K7 980 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 XDHP47989 1333 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 GOLGA6L9A6NEM1 432 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 MFAP3LO75121 409 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 OAS2P29728 719 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 ADGRA1Q86SQ6 560 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 UBXN4Q92575 508 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 CSRNP2Q9H175 543 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 COL16A1Q07092 1604 aaPredicted RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 M0R2N6 131 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 FGD1P98174 961 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 CFAP100Q494V2 611 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 NOM1Q5C9Z4 860 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 EXOC4Q96A65 974 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 TTYH3Q9C0H2 523 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 LIMA1Q9UHB6 759 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 TMCO3Q6UWJ1 677 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
CHD7-212ENST00000618450 NEK11Q8NG66 645 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 LRRC15Q8TF66 581 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 PAGE5Q96GU1 130 aa9.07□□□□□ -0.96
CHD7-212ENST00000618450 ZBTB43O43298 467 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 URI1O94763 535 aaPredicted RBP9.06□□□□□ -0.96
CHD7-212ENST00000618450 CTSWP56202 376 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 NAA15Q9BXJ9 866 aaKnown RBP9.06□□□□□ -0.96
CHD7-212ENST00000618450 SUGCTQ9HAC7 445 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 N4BP1O75113 896 aaKnown RBP9.06□□□□□ -0.96
CHD7-212ENST00000618450 AARSP49588 968 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD7-212ENST00000618450 BRD3Q15059 726 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 SPATA1Q5VX52 437 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
CHD7-212ENST00000618450 CNNM3Q8NE01 707 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 ZNF507Q8TCN5 953 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 CALCOCO1Q9P1Z2 691 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 KCNJ14Q9UNX9 436 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 COL24A1Q17RW2 1714 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 CCDC66A2RUB6 948 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 CDKL5O76039 1030 aa9.06□□□□□ -0.96
CHD7-212ENST00000618450 SERPINC1P01008 464 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms