RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PPP1R9BQ96SB3 815 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 ROBO3Q96MS0 1386 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 GAKO14976 1311 aa20.11■□□□□ 0.81
PCDHGC3-205ENST00000617641 PLCD1P51178 756 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 PPP2R5BQ15173 497 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 CERS3Q8IU89 383 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 AMOTL1Q8IY63 956 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 FAM163AQ96GL9 167 aaPredicted RBP20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 PCDHA7Q9UN72 937 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 YEATS4O95619 227 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 RHBDL3P58872 404 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 SLC44A5Q8NCS7 719 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 KCNJ14Q9UNX9 436 aa20.1■□□□□ 0.81
PCDHGC3-205ENST00000617641 DDAH1O94760 285 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 U2AF2P26368 475 aaKnown RBP eCLIP20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 TFAP4Q01664 338 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 ANO1Q5XXA6 986 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 CERS5Q8N5B7 392 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 CALM1P0DP23 149 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 CALM2P0DP24 149 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 CALM3P0DP25 149 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 PLCG2P16885 1265 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 FUT2Q10981 343 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 SF3A1Q15459 793 aaKnown RBP20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 MXD3Q9BW11 206 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
PCDHGC3-205ENST00000617641 MYH6P13533 1939 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 H0YIN7 160 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 MMP1P03956 469 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 RCSD1Q6JBY9 416 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 KLHL34Q8N239 644 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 FSIP1Q8NA03 581 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 KCNG4Q8TDN1 519 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 STK32BQ9NY57 414 aa20.08■□□□□ 0.81
PCDHGC3-205ENST00000617641 FLT1P17948 1338 aa20.08■□□□□ 0.8
PCDHGC3-205ENST00000617641 SPTLC2O15270 562 aa20.08■□□□□ 0.8
PCDHGC3-205ENST00000617641 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.8
PCDHGC3-205ENST00000617641 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.8
PCDHGC3-205ENST00000617641 DDX60LQ5H9U9 1706 aaKnown RBP20.08■□□□□ 0.8
PCDHGC3-205ENST00000617641 hCG_1642624A0A1W2PR95 340 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 CHRNA5P30532 468 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 BTBD18B2RXH4 712 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 G3V3G9 751 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 AKAP17AQ02040 695 aaKnown RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 ADALQ6DHV7 355 aa20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 RBM43Q6ZSC3 357 aaKnown RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 DIS3L2Q8IYB7 885 aaKnown RBP20.07■□□□□ 0.8
PCDHGC3-205ENST00000617641 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
PCDHGC3-205ENST00000617641 SAFBQ15424 915 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHGC3-205ENST00000617641 STYK1Q6J9G0 422 aa20.06■□□□□ 0.8
PCDHGC3-205ENST00000617641 TMTC3Q6ZXV5 915 aa20.06■□□□□ 0.8
PCDHGC3-205ENST00000617641 ENGASEQ8NFI3 743 aa20.06■□□□□ 0.8
PCDHGC3-205ENST00000617641 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 FAM160A1Q05DH4 1040 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 TYRO3Q06418 890 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 PKN1Q16512 942 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 NOSTRINQ8IVI9 506 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 MRPS27Q92552 414 aaKnown RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 SHISA4Q96DD7 197 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 EYA3Q99504 573 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 V9GY48 417 aaPredicted RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 PRPF3O43395 683 aaKnown RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 PDLIM2Q96JY6 352 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
PCDHGC3-205ENST00000617641 A0A1W2PQ27 194 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 A0A1W2PQ64 194 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 A0A1W2PQD8 194 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 RASA1P20936 1047 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 SLC39A14Q15043 492 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 TRIM44Q96DX7 344 aaPredicted RBP20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 KAT14Q9H8E8 782 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 MYH1P12882 1939 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 QSER1Q2KHR3 1735 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 A0A1B0GVL5 298 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 MARCKSP29966 332 aaPredicted RBP20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 MAP3K14Q99558 947 aa20.04■□□□□ 0.8
PCDHGC3-205ENST00000617641 VPS54Q9P1Q0 977 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms