RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SMYD2Q9NRG4 433 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 NUB1Q9Y5A7 615 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 BRDTQ58F21 947 aaPredicted RBP6.65□□□□□ -1.35
RFX3-212ENST00000617270 HAUS3Q68CZ6 603 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 SUFUQ9UMX1 484 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 NIP7Q9Y221 180 aaKnown RBP eCLIP6.65□□□□□ -1.35
RFX3-212ENST00000617270 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.35
RFX3-212ENST00000617270 RUSC2Q8N2Y8 1516 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 CFTRP13569 1480 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 ZYXQ15942 572 aaKnown RBP6.65□□□□□ -1.35
RFX3-212ENST00000617270 NLRP3Q96P20 1036 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 TAB2Q9NYJ8 693 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 PHF8Q9UPP1 1060 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 PA2G4Q9UQ80 394 aaKnown RBP6.65□□□□□ -1.35
RFX3-212ENST00000617270 EXOC3O60645 756 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 PALM2Q8IXS6 379 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 P3H4Q92791 437 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 MEIS3Q99687 375 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.35
RFX3-212ENST00000617270 ZNF408Q9H9D4 720 aa6.65□□□□□ -1.35
RFX3-212ENST00000617270 HNRNPCL2B2RXH8 293 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 HNRNPCL1O60812 293 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 FLOT1O75955 427 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 IFRD2Q12894 506 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 KRT81Q14533 505 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 MMEL1Q495T6 779 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 TRIM50Q86XT4 487 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 ABTB1Q969K4 478 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 LRRC9Q6ZRR7 1453 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 RPS6KA1Q15418 735 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 CHRNA2Q15822 529 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 LONRF2Q1L5Z9 754 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 CROCCP2Q86T23 111 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 LRGUKQ96M69 825 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 NSFL1CQ9UNZ2 370 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 ABL1P00519 1130 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 OATP04181 439 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 LDHBP07195 334 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 IRX4P78413 519 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 PAK1Q13153 545 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 CFAP221Q4G0U5 840 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 MYLK4Q86YV6 388 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 NELFCDQ8IXH7 590 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 SYCE1Q8N0S2 351 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 HELLSQ9NRZ9 838 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
RFX3-212ENST00000617270 IL15P40933 162 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 TXKP42681 527 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 YARSP54577 528 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 POLKQ9UBT6 870 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 ATP1A2P50993 1020 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 KLHL30Q0D2K2 578 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 AP1ARQ63HQ0 302 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 RNF217Q8TC41 542 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 SLF1Q9BQI6 1058 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 ZC4H2Q9NQZ6 224 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 PRPF6O94906 941 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 SYF2O95926 243 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 SMAP1Q8IYB5 467 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 ANKRD35Q8N283 1001 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 RNF169Q8NCN4 708 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 IFIH1Q9BYX4 1025 aaKnown RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 DNAJC8O75937 253 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 GNGT1P63211 74 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 ARHGAP44Q17R89 818 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 SCHIP1Q9P0W5 487 aaPredicted RBP6.64□□□□□ -1.35
RFX3-212ENST00000617270 KCNH3Q9ULD8 1083 aa6.64□□□□□ -1.35
RFX3-212ENST00000617270 A6NNZ2 444 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 ADCY8P40145 1251 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 ARHGAP4P98171 946 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 TUBB8Q3ZCM7 444 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 SFMBT2Q5VUG0 894 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 CREB3L3Q68CJ9 461 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 TYW1BQ6NUM6 668 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.63□□□□□ -1.35
RFX3-212ENST00000617270 MYCT1Q8N699 235 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 PARD3BQ8TEW8 1205 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 AZI2Q9H6S1 392 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 SH2D4AQ9H788 454 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 PICK1Q9NRD5 415 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 STAM2O75886 525 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 FOXD4Q12950 439 aaPredicted RBP6.63□□□□□ -1.35
RFX3-212ENST00000617270 HP1BP3Q5SSJ5 553 aaPredicted RBP6.63□□□□□ -1.35
RFX3-212ENST00000617270 KRT82Q9NSB4 513 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 FAM207AQ9NSI2 230 aaPredicted RBP6.63□□□□□ -1.35
RFX3-212ENST00000617270 SFMBT1Q9UHJ3 866 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 ATF7P17544 494 aaPredicted RBP6.63□□□□□ -1.35
RFX3-212ENST00000617270 SLC12A1Q13621 1099 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
RFX3-212ENST00000617270 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 IVNS1ABPQ9Y6Y0 642 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 CLTAP09496 248 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 COPS6Q7L5N1 327 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 DYMQ7RTS9 669 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 MED10Q9BTT4 135 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 CCDC68Q9H2F9 335 aa6.63□□□□□ -1.35
RFX3-212ENST00000617270 SYNJ2BP-COX16A0A087WUM0 186 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms