RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 NLRP12P59046 1061 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 TIMM10P62072 90 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 NAA25Q14CX7 972 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 PLBD2Q8NHP8 589 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 MAGEC3Q8TD91 643 aa13.08□□□□□ -0.32
TP53-222ENST00000617185 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
TP53-222ENST00000617185 DDX20Q9UHI6 824 aaKnown RBP13.08□□□□□ -0.32
TP53-222ENST00000617185 CAND2O75155 1236 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 RASSF9O75901 435 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 CCDC40Q4G0X9 1142 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 CCDC129Q6ZRS4 1044 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 MICAL1Q8TDZ2 1067 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 PIGBQ92521 554 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 BRF1Q92994 677 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ATP6V0A4Q9HBG4 840 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ADAMTS7Q9UKP4 1686 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 EME2A4GXA9 379 aaPredicted RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 KIF5CO60282 957 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ATP1A3P13637 1013 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 GNGT1P63211 74 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ACTN3Q08043 901 aaPredicted RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 KIAA1328Q86T90 577 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
TP53-222ENST00000617185 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
TP53-222ENST00000617185 CCDC175P0C221 793 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 SNCBQ16143 134 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 WHAMMP3Q1A5X7 153 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 TLDC1Q6P9B6 456 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 COG1Q8WTW3 980 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 ZNF202O95125 648 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 GGCXP38435 758 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 ME1P48163 572 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 RIN2Q8WYP3 895 aaPredicted RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 MRPS27Q92552 414 aaKnown RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 DPF2Q92785 391 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 CENPHQ9H3R5 247 aa13.06□□□□□ -0.32
TP53-222ENST00000617185 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
TP53-222ENST00000617185 CTAGE9A4FU28 777 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 PFKFB2O60825 505 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 TNNI3KQ59H18 835 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 CCDC148Q8NFR7 591 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 IRX2Q9BZI1 471 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 EHD4Q9H223 541 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 FPGT-TNNI3KV9GXZ4 949 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 MYO1BO43795 1136 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 AP1G2O75843 785 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 PECAM1P16284 738 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
TP53-222ENST00000617185 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
TP53-222ENST00000617185 GBP2P32456 591 aaPredicted RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
TP53-222ENST00000617185 CASP7P55210 303 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 FOXO4P98177 505 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 ACSBG1Q96GR2 724 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 HSD3B7Q9H2F3 369 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 HOMER3Q9NSC5 361 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 MYO6Q9UM54 1294 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 SKAP2O75563 359 aaPredicted RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 SLC3A2P08195 630 aaKnown RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 SLC8A1P32418 973 aa13.04□□□□□ -0.32
TP53-222ENST00000617185 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
TP53-222ENST00000617185 PDILTQ8N807 584 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms