RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TGFBRAP1Q8WUH2 860 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 ITSN2Q9NZM3 1697 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 CALCRLQ16602 461 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 DYMQ7RTS9 669 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 UBLCP1Q8WVY7 318 aaPredicted RBP19.74■□□□□ 0.75
ATXN2-227ENST00000616825 UHRF1BP1Q6BDS2 1440 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 USP17L12C9JPN9 530 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 USP17L21D6R901 530 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 ALDH1B1P30837 517 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 CEP128Q6ZU80 1094 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 FAM76AQ8TAV0 307 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 TRIM6Q9C030 488 aaPredicted RBP19.74■□□□□ 0.75
ATXN2-227ENST00000616825 KCNJ14Q9UNX9 436 aa19.74■□□□□ 0.75
ATXN2-227ENST00000616825 STIM2Q9P246 746 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 KCNG1Q9UIX4 513 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 E7EWF7 191 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 ARHGAP6O43182 974 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
ATXN2-227ENST00000616825 CFAP157Q5JU67 520 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 UTP14CQ5TAP6 766 aaKnown RBP19.73■□□□□ 0.75
ATXN2-227ENST00000616825 MAEAQ7L5Y9 396 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 UBL4BQ8N7F7 174 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 KDM2BQ8NHM5 1336 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 E7EVH7 732 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 POSTNQ15063 836 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 CLUL1Q15846 466 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 MYCT1Q8N699 235 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 CHURC1Q8WUH1 139 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 USP44Q9H0E7 712 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 KIAA0232Q92628 1395 aa19.73■□□□□ 0.75
ATXN2-227ENST00000616825 JAK2O60674 1132 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 MFSD14BQ5SR56 506 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 CDAN1Q8IWY9 1227 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 RNF34Q969K3 372 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 COL17A1Q9UMD9 1497 aaPredicted RBP19.72■□□□□ 0.75
ATXN2-227ENST00000616825 CTTNBP2NLQ9P2B4 639 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 CD19P15391 556 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 DNM2P50570 870 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 NLRP12P59046 1061 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 USH1GQ495M9 461 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 SSH3Q8TE77 659 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 CBX8Q9HC52 389 aa19.72■□□□□ 0.75
ATXN2-227ENST00000616825 FLOT1O75955 427 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 CABP7Q86V35 215 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 ZNF654Q8IZM8 581 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 VPS54Q9P1Q0 977 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 ATP5DP30049 168 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 RASA3Q14644 834 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 DCUN1D2Q6PH85 259 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 CCDC110Q8TBZ0 833 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 DDX23Q9BUQ8 820 aaKnown RBP19.71■□□□□ 0.75
ATXN2-227ENST00000616825 NT5C3AQ9H0P0 336 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 TAB2Q9NYJ8 693 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 ARPP21Q9UBL0 812 aaPredicted RBP19.71■□□□□ 0.75
ATXN2-227ENST00000616825 ANAPC4Q9UJX5 808 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 DDX39AO00148 427 aaKnown RBP19.71■□□□□ 0.75
ATXN2-227ENST00000616825 GTF2IP78347 998 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 KLHL30Q0D2K2 578 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 MYSM1Q5VVJ2 828 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 FNBP4Q8N3X1 1017 aaPredicted RBP19.71■□□□□ 0.75
ATXN2-227ENST00000616825 TEKT1Q969V4 418 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
ATXN2-227ENST00000616825 IMPACTQ9P2X3 320 aa19.71■□□□□ 0.75
ATXN2-227ENST00000616825 RAD51AP2Q09MP3 1159 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 STAMQ92783 540 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 ODF2LQ9ULJ1 636 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 RNASE9P60153 205 aaKnown RBP19.7■□□□□ 0.74
ATXN2-227ENST00000616825 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 SECISBP2LQ93073 1101 aaKnown RBP19.7■□□□□ 0.74
ATXN2-227ENST00000616825 ZBTB9Q96C00 473 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
ATXN2-227ENST00000616825 BCRP11274 1271 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 ZNF75DP51815 510 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 UAP1Q16222 522 aaPredicted RBP19.7■□□□□ 0.74
ATXN2-227ENST00000616825 ATP8A2Q9NTI2 1148 aa19.7■□□□□ 0.74
ATXN2-227ENST00000616825 CDC37L1Q7L3B6 337 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 NELFCDQ8IXH7 590 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 USP40Q9NVE5 1235 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 SHANK2Q9UPX8 1470 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 DAPK3O43293 454 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 IRX3P78415 501 aaPredicted RBP19.69■□□□□ 0.74
ATXN2-227ENST00000616825 PPIP5K2O43314 1243 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 GCNT3O95395 438 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 PPARAQ07869 468 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 PRKG1Q13976 671 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 FAM47AQ5JRC9 791 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 NLRX1Q86UT6 975 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 MRPL44Q9H9J2 332 aaKnown RBP19.69■□□□□ 0.74
ATXN2-227ENST00000616825 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 CTSWP56202 376 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 MICALL1Q8N3F8 863 aa19.69■□□□□ 0.74
ATXN2-227ENST00000616825 GABPB2Q8TAK5 448 aaPredicted RBP19.69■□□□□ 0.74
ATXN2-227ENST00000616825 EAF2Q96CJ1 260 aaPredicted RBP19.69■□□□□ 0.74
ATXN2-227ENST00000616825 SMCO2A6NFE2 343 aa19.68■□□□□ 0.74
ATXN2-227ENST00000616825 IRX5P78411 483 aaPredicted RBP19.68■□□□□ 0.74
ATXN2-227ENST00000616825 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms