RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 MIPEPQ99797 713 aa6.13□□□□□ -1.43
CBWD1-224ENST00000616803 NOC4LQ9BVI4 516 aaKnown RBP6.13□□□□□ -1.43
CBWD1-224ENST00000616803 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
CBWD1-224ENST00000616803 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
CBWD1-224ENST00000616803 CARMIL2Q6F5E8 1435 aa6.13□□□□□ -1.43
CBWD1-224ENST00000616803 CCDC180Q9P1Z9 1646 aa6.13□□□□□ -1.43
CBWD1-224ENST00000616803 CILPO75339 1184 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 CST3P01034 146 aaPredicted RBP6.12□□□□□ -1.43
CBWD1-224ENST00000616803 IFI16Q16666 785 aaKnown RBP6.12□□□□□ -1.43
CBWD1-224ENST00000616803 HID1Q8IV36 788 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 GIPC2Q8TF65 315 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 FBXL18Q96ME1 805 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 HSPA12BQ96MM6 686 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 SEMA3GQ9NS98 782 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 VTI1BQ9UEU0 232 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
CBWD1-224ENST00000616803 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
CBWD1-224ENST00000616803 PAPLNO95428 1278 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 PGRP06401 933 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 ITGB5P18084 799 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 FUT4P22083 530 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 CAP2P40123 477 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 FGD1P98174 961 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 MRPL58Q14197 206 aaKnown RBP6.11□□□□□ -1.43
CBWD1-224ENST00000616803 CRELD1Q96HD1 420 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 MIR1-1HGQ9H1L0 117 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 MKNK2Q9HBH9 465 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 ST14Q9Y5Y6 855 aa6.11□□□□□ -1.43
CBWD1-224ENST00000616803 CHURC1-FNTBB4DL54 471 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 RPL6Q02878 288 aaKnown RBP6.1□□□□□ -1.43
CBWD1-224ENST00000616803 PLCL1Q15111 1095 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 TSNAXIP1Q2TAA8 658 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 LETMD1Q6P1Q0 360 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 FBXL19Q6PCT2 694 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 DNAJB8Q8NHS0 232 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 TMEM87BQ96K49 555 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 Q96M66 194 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 TMEM74Q96NL1 305 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 RSRP1Q9BUV0 290 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 KBTBD4Q9NVX7 518 aa6.1□□□□□ -1.43
CBWD1-224ENST00000616803 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
CBWD1-224ENST00000616803 PITPNM2Q9BZ72 1349 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 TMEM265A0A087WTH1 108 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 LRRN2O75325 713 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 CBX7O95931 251 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 GBP2P32456 591 aaPredicted RBP6.09□□□□□ -1.43
CBWD1-224ENST00000616803 LMNB2Q03252 620 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 CDKAL1Q5VV42 579 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 OGFOD2Q6N063 350 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 ERMP1Q7Z2K6 904 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 MCATQ8IVS2 390 aaKnown RBP6.09□□□□□ -1.43
CBWD1-224ENST00000616803 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
CBWD1-224ENST00000616803 HRASLS5Q96KN8 279 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 CAPN6Q9Y6Q1 641 aa6.09□□□□□ -1.43
CBWD1-224ENST00000616803 TLR3O15455 904 aaKnown RBP6.08□□□□□ -1.44
CBWD1-224ENST00000616803 CRKP46108 304 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 JAG1P78504 1218 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 TNK2Q07912 1038 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 GOLM1Q8NBJ4 401 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 KCT2Q8NC54 265 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 GATAD2BQ8WXI9 593 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
CBWD1-224ENST00000616803 GTF2IRD1Q9UHL9 959 aa6.08□□□□□ -1.44
CBWD1-224ENST00000616803 TPX2Q9ULW0 747 aaKnown RBP6.08□□□□□ -1.44
CBWD1-224ENST00000616803 H3BS24 57 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 ZNF865P0CJ78 1059 aaPredicted RBP6.07□□□□□ -1.44
CBWD1-224ENST00000616803 ZNF16P17020 682 aaPredicted RBP6.07□□□□□ -1.44
CBWD1-224ENST00000616803 FYB2Q5VWT5 728 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 ARHGAP27Q6ZUM4 889 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 MFSD2AQ8NA29 543 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 MISP3Q96FF7 219 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 ADAMTS1Q9UHI8 967 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 SNX11Q9Y5W9 270 aa6.07□□□□□ -1.44
CBWD1-224ENST00000616803 GREM1O60565 184 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 PLCG1P19174 1290 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
CBWD1-224ENST00000616803 SFRP5Q5T4F7 317 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 SLC6A19Q695T7 634 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 RELL1Q8IUW5 271 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 STK11IPQ8N1F8 1099 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 AGBL5Q8NDL9 886 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 REV1Q9UBZ9 1251 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 MAPK8IP1Q9UQF2 711 aa6.06□□□□□ -1.44
CBWD1-224ENST00000616803 PRR36Q9H6K5 1346 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 LMNB1P20700 586 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 ZP2Q05996 745 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 BAHD1Q8TBE0 780 aaPredicted RBP6.05□□□□□ -1.44
CBWD1-224ENST00000616803 PI4K2BQ8TCG2 481 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 UBE2FQ969M7 185 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 RC3H2Q9HBD1 1191 aaKnown RBP6.05□□□□□ -1.44
CBWD1-224ENST00000616803 MRS2Q9HD23 443 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 TACC3Q9Y6A5 838 aa6.05□□□□□ -1.44
CBWD1-224ENST00000616803 ESR1P03372 595 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms