RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SP110Q9HB58 689 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 SRRDQ9UH36 339 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 TMEM59LQ9UK28 342 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ST14Q9Y5Y6 855 aa4.92□□□□□ -1.62
HMGB1P24-202ENST00000615653 ZC3H12DA2A288 527 aaKnown RBP4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 FAM155AB1AL88 458 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 H3BRB1 525 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 FZD6O60353 706 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 GSTP1P09211 210 aaKnown RBP4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 PTPN12Q05209 780 aaKnown RBP4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 CDKAL1Q5VV42 579 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 TMEM132EQ6IEE7 984 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 TXNDC2Q86VQ3 553 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 GALNT12Q8IXK2 581 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 PANK1Q8TE04 598 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 SGPP1Q9BX95 441 aa4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 TUT1Q9H6E5 874 aaKnown RBP4.91□□□□□ -1.62
HMGB1P24-202ENST00000615653 SLC22A31A6NKX4 558 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 PRR33A8MZF0 331 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 NDUFB5O43674 189 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 PI3P19957 117 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 SERPINB4P48594 390 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 AFF3P51826 1226 aaKnown RBP4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 HK2P52789 917 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 KIAA0319Q5VV43 1072 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 SP8Q8IXZ3 490 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 SLC16A11Q8NCK7 471 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 SORCS2Q96PQ0 1159 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 CITED4Q96RK1 184 aa4.9□□□□□ -1.63
HMGB1P24-202ENST00000615653 BRD1O95696 1058 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 NEFLP07196 543 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 TRHRP34981 398 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 PDE3BQ13370 1112 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 RPS26P11Q5JNZ5 115 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 FRMD5Q7Z6J6 570 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 MFSD4AQ8N468 514 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 BDH2Q9BUT1 245 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 ADAM7Q9H2U9 754 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 ANO2Q9NQ90 1003 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 BRPF3Q9ULD4 1205 aa4.89□□□□□ -1.63
HMGB1P24-202ENST00000615653 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
HMGB1P24-202ENST00000615653 MENTQ9BUN1 341 aa4.88□□□□□ -1.63
HMGB1P24-202ENST00000615653 LUC7LQ9NQ29 371 aaKnown RBP4.88□□□□□ -1.63
HMGB1P24-202ENST00000615653 CCDC87Q9NVE4 849 aa4.88□□□□□ -1.63
HMGB1P24-202ENST00000615653 GNEQ9Y223 722 aaKnown RBP4.88□□□□□ -1.63
HMGB1P24-202ENST00000615653 NTF4P34130 210 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 ARHGAP4P98171 946 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 UBE3DQ7Z6J8 389 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 PDZD3Q86UT5 571 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 SYT8Q8NBV8 401 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 UBE2FQ969M7 185 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 INTS4Q96HW7 963 aaKnown RBP4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 SIGLEC10Q96LC7 697 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 ADAMTS10Q9H324 1103 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 WDR26Q9H7D7 661 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 CWC22Q9HCG8 908 aaKnown RBP4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 PALD1Q9ULE6 856 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 CAPN6Q9Y6Q1 641 aa4.87□□□□□ -1.63
HMGB1P24-202ENST00000615653 MATN3O15232 486 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 ESR1P03372 595 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 HMGA2P52926 109 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 SFRP5Q5T4F7 317 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 IRAK3Q9Y616 596 aa4.86□□□□□ -1.63
HMGB1P24-202ENST00000615653 SOWAHDA6NJG2 315 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 PATL2C9JE40 543 aaKnown RBP4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 ZNF157P51786 506 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 FAAP100Q0VG06 881 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 PDZD8Q8NEN9 1154 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 KCNB2Q92953 911 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 DMRTB1Q96MA1 342 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 C19orf44Q9H6X5 657 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 EPB41L4AQ9HCS5 686 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 ZSWIM5Q9P217 1185 aa4.85□□□□□ -1.63
HMGB1P24-202ENST00000615653 GRIN3BO60391 1043 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 SLITRK5O94991 958 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 FSHBP01225 129 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 FGD1P98174 961 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 KCNA1Q09470 495 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 RTP5Q14D33 572 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 TMPRSS7Q7RTY8 843 aa4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 ALKBH8Q96BT7 664 aaKnown RBP4.84□□□□□ -1.63
HMGB1P24-202ENST00000615653 CPNE3O75131 537 aaKnown RBP4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 CILPO75339 1184 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 LRIG2O94898 1065 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 NR0B2Q15466 257 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 VMACQ2NL98 169 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 PPM1JQ5JR12 505 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 ARMCX6Q7L4S7 300 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 RBCK1Q9BYM8 510 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 EHD4Q9H223 541 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 ABCB6Q9NP58 842 aa4.83□□□□□ -1.64
HMGB1P24-202ENST00000615653 K7ESM1 405 aa4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 RING1Q06587 406 aa4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 TIGD5Q53EQ6 642 aa4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 ZFYVE27Q5T4F4 411 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms