RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 LRSAM1Q6UWE0 723 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 SPAG5Q96R06 1193 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 ZBTB7AO95365 584 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 MTX1Q13505 466 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 TICAM2Q86XR7 235 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
CLTCL1-208ENST00000615606 SLFN13Q68D06 897 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 MYO3BQ8WXR4 1341 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 CPDO75976 1380 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 FAM200AQ8TCP9 573 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 PUF60Q9UHX1 559 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 MMRN2Q9H8L6 949 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 CHMP2AO43633 222 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 ERLIN1O75477 346 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 RPL13P26373 211 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 GADL1Q6ZQY3 521 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 BRIP1Q9BX63 1249 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 DEPDC5O75140 1603 aa10.66□□□□□ -0.7
CLTCL1-208ENST00000615606 CUTAO60888 179 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 SASH1O94885 1247 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 TXKP42681 527 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 UBASH3AP57075 661 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 NFIXQ14938 502 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ANO6Q4KMQ2 910 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 MAP4K1Q92918 833 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 AZI2Q9H6S1 392 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ANKRD62A6NC57 917 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 SMCO2A6NFE2 343 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 NT5C2P49902 561 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 SMTNP53814 917 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 KIF22Q14807 665 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 MCF2L2Q86YR7 1114 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 LRRC47Q8N1G4 583 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 PAGR1Q9BTK6 254 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 MINPP1Q9UNW1 487 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 USP32Q8NFA0 1604 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ADGRB1O14514 1584 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ZMYM6O95789 1325 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 KLRF2D3W0D1 207 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 USP14P54578 494 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 PLIN2Q99541 437 aa10.65□□□□□ -0.7
CLTCL1-208ENST00000615606 MST1RQ04912 1400 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 ARHGEF35A5YM69 484 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 NBPF26B4DH59 902 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 DYNLL1P63167 89 aaKnown RBP10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 GNPTABQ3T906 1256 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 NBPF15Q8N660 670 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 LRWD1Q9UFC0 647 aa10.65□□□□□ -0.71
CLTCL1-208ENST00000615606 ADCY9O60503 1353 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 CALCRLQ16602 461 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 GPATCH4Q5T3I0 446 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 IFT74Q96LB3 600 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 ALS2CR12Q96Q35 445 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 ANTXR1Q9H6X2 564 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 VPS54Q9P1Q0 977 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 REREQ9P2R6 1566 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 FBXO11Q86XK2 927 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 KANSL2Q9H9L4 492 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 PFKFB2O60825 505 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 ADCY5O95622 1261 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 ALAS1P13196 640 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 PI4KBQ9UBF8 816 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 SLIT1O75093 1534 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 GOLGA6L9A6NEM1 432 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 GOLGA6L10A6NI86 522 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 FLOT1O75955 427 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 ZSCAN30Q86W11 494 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 LSG1Q9H089 658 aaKnown RBP10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 KCNJ14Q9UNX9 436 aa10.64□□□□□ -0.71
CLTCL1-208ENST00000615606 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 AKR1B10O60218 316 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 POLR2MP0CAP2 368 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 MECOMQ03112 1051 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 ASPRV1Q53RT3 343 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 SNX29Q8TEQ0 813 aa10.63□□□□□ -0.71
CLTCL1-208ENST00000615606 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms