RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 MCM8Q9UJA3 840 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 PDIA3P30101 505 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 CPSF2Q9P2I0 782 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 HSF2BPO75031 334 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 ERCC3P19447 782 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 WDR93Q6P2C0 686 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 KIAA1328Q86T90 577 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 SAR1BQ9Y6B6 198 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 MROH7-TTC4A0A0A0MT08 1334 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 PDHBP11177 359 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 HAND2P61296 217 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 PROSER3Q2NL68 480 aa11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 SPATS2LQ9NUQ6 558 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-208ENST00000615468 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 PREPLQ4J6C6 727 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 PANX2Q96RD6 677 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 TUBE1Q9UJT0 475 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 SSR1P43307 286 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 CWF19L2Q2TBE0 894 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 STOX1Q6ZVD7 989 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 AIDAQ96BJ3 306 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 NAA15Q9BXJ9 866 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 N4BP3O15049 544 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 C21orf2O43822 256 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 IPO7O95373 1038 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 CNGA4Q8IV77 575 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 GRAMD1CQ8IYS0 662 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 RSRC1Q96IZ7 334 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-208ENST00000615468 NUTM2BA6NNL0 878 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 NUTM2EB1AL46 878 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 E7EVH7 732 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 COBLO75128 1261 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 MYBL2P10244 700 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CCDC122Q5T0U0 273 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 METTL16Q86W50 562 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 SPDL1Q96EA4 605 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 PPANQ9NQ55 473 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 KIF3CO14782 793 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 IRF6O14896 467 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 MYO1BO43795 1136 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 GUCY1A3Q02108 690 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CRYMQ14894 314 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 SLC40A1Q9NP59 571 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 BAIAP2L1Q9UHR4 511 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 USP42Q9H9J4 1324 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CCNHP51946 323 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 SEC24CP53992 1094 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CKAP4Q07065 602 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 DDR1Q08345 913 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 TRIM29Q14134 588 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 SLC39A14Q15043 492 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 ZKSCAN8Q15776 578 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 FOXP4Q8IVH2 680 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 CRB1P82279 1406 aa11.66□□□□□ -0.54
TNFAIP3-208ENST00000615468 ENO4A6NNW6 628 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 KIF28PB7ZC32 967 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 SASH1O94885 1247 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 ADAMTS2O95450 1211 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 FDPSP14324 419 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 CABP4P57796 275 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 EIF4A1P60842 406 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 C2orf54Q08AI8 447 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 SF3A3Q12874 501 aaKnown RBP eCLIP11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 SHC4Q6S5L8 630 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
TNFAIP3-208ENST00000615468 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms