RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 ARAP2Q8WZ64 1704 aa9.07□□□□□ -0.96
FAM228B-209ENST00000615135 DDX60LQ5H9U9 1706 aaKnown RBP9.06□□□□□ -0.96
FAM228B-209ENST00000615135 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 HOXB7P09629 217 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 COL6A1P12109 1028 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 IL1R1P14778 569 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 EMP3P54852 163 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 VARS2Q5ST30 1063 aaKnown RBP9.06□□□□□ -0.96
FAM228B-209ENST00000615135 CCDC30Q5VVM6 783 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 TATDN2Q93075 761 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 CCDC85AQ96PX6 553 aaPredicted RBP9.06□□□□□ -0.96
FAM228B-209ENST00000615135 PARK7Q99497 189 aaKnown RBP9.06□□□□□ -0.96
FAM228B-209ENST00000615135 TMEM39BQ9GZU3 492 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 ANKRD2Q9GZV1 360 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 ZBTB40Q9NUA8 1239 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 POLR3EQ9NVU0 708 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 SERPINA10Q9UK55 444 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 OGDHLQ9ULD0 1010 aa9.06□□□□□ -0.96
FAM228B-209ENST00000615135 PFASO15067 1338 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 CTSWP56202 376 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 MYLIPQ8WY64 445 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 ZKSCAN4Q969J2 545 aaPredicted RBP9.05□□□□□ -0.96
FAM228B-209ENST00000615135 SNX27Q96L92 541 aa9.05□□□□□ -0.96
FAM228B-209ENST00000615135 TTYH1Q9H313 450 aaPredicted RBP9.05□□□□□ -0.96
FAM228B-209ENST00000615135 TDRD3Q9H7E2 651 aaKnown RBP9.05□□□□□ -0.96
FAM228B-209ENST00000615135 MYH3P11055 1940 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 F8W031 263 aaPredicted RBP9.04□□□□□ -0.96
FAM228B-209ENST00000615135 HMMRO75330 724 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 TNNI2P48788 182 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 FKBP5Q13451 457 aaPredicted RBP9.04□□□□□ -0.96
FAM228B-209ENST00000615135 BECN1Q14457 450 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 GPAT2Q6NUI2 795 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 WRNIP1Q96S55 665 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 CHMP4AQ9BY43 222 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 LNPKQ9C0E8 428 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 GREM2Q9H772 168 aa9.04□□□□□ -0.96
FAM228B-209ENST00000615135 TCP10L2B9ZVM9 353 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 FOSL2P15408 326 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 RBM5P52756 815 aaKnown RBP eCLIP9.03□□□□□ -0.96
FAM228B-209ENST00000615135 SMAD3P84022 425 aaKnown RBP9.03□□□□□ -0.96
FAM228B-209ENST00000615135 ATXN2LQ8WWM7 1075 aaKnown RBP9.03□□□□□ -0.96
FAM228B-209ENST00000615135 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 C1QTNF1Q9BXJ1 281 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 CWC25Q9NXE8 425 aaPredicted RBP9.03□□□□□ -0.96
FAM228B-209ENST00000615135 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 SLC45A1Q9Y2W3 748 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 MUC6Q6W4X9 2439 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
FAM228B-209ENST00000615135 POTEB3A0JP26 581 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 CXCL11O14625 94 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 TNPO2O14787 897 aaKnown RBP9.02□□□□□ -0.97
FAM228B-209ENST00000615135 HMGCRP04035 888 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 CYP2C8P10632 490 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
FAM228B-209ENST00000615135 NUCB1Q02818 461 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 FLIIQ13045 1269 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 FKBP1CQ5VVH2 108 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 POTEBQ6S5H4 581 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 RIC3Q7Z5B4 369 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 JARID2Q92833 1246 aaPredicted RBP9.02□□□□□ -0.97
FAM228B-209ENST00000615135 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
FAM228B-209ENST00000615135 ZNF112Q9UJU3 913 aa9.02□□□□□ -0.97
FAM228B-209ENST00000615135 IGHMBP2P38935 993 aaKnown RBP9.01□□□□□ -0.97
FAM228B-209ENST00000615135 LRRC26Q2I0M4 334 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 SH3D19Q5HYK7 790 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 MAP3K21Q5TCX8 1036 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 ANKRD45Q5TZF3 282 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 COA7Q96BR5 231 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
FAM228B-209ENST00000615135 MYD88Q99836 296 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 LBHD1Q9BQE6 289 aaPredicted RBP9.01□□□□□ -0.97
FAM228B-209ENST00000615135 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
FAM228B-209ENST00000615135 RPAP1Q9BWH6 1393 aaPredicted RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 DDX11L8A8MPP1 907 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 INPP5BP32019 993 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 CHRNDQ07001 517 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 SHHQ15465 462 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 SKIV2LQ15477 1246 aaKnown RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 DCAF15Q66K64 600 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 ZNF804AQ7Z570 1209 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 PACS2Q86VP3 889 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 ADAMTS19Q8TE59 1207 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 ASB2Q96Q27 587 aa9□□□□□ -0.97
FAM228B-209ENST00000615135 METTL22Q9BUU2 404 aaPredicted RBP9□□□□□ -0.97
FAM228B-209ENST00000615135 ZNF341Q9BYN7 854 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms