RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 PDE4BQ07343 736 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 LBRQ14739 615 aaKnown RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 SLMAPQ14BN4 828 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 PAF1Q8N7H5 531 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 CCDC89Q8N998 374 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 NGDNQ8NEJ9 315 aaKnown RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 UHMK1Q8TAS1 419 aaKnown RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 DTNBP1Q96EV8 351 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 IL17RAQ96F46 866 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 MRFAP1L1Q96HT8 127 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 SPACA7Q96KW9 195 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 FHDC1Q9C0D6 1143 aaPredicted RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 PDGFDQ9GZP0 370 aaPredicted RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 ESF1Q9H501 851 aaKnown RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 RAB6BQ9NRW1 208 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 FAM53CQ9NYF3 392 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 LMCD1Q9NZU5 365 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.35□□□□□ -1.39
CCL16-206ENST00000613642 TBC1D7Q9P0N9 293 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 CFAP45Q9UL16 551 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 SLC30A1Q9Y6M5 507 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 NDUFB9Q9Y6M9 179 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 NESP48681 1621 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 HMGXB3Q12766 1538 aa6.35□□□□□ -1.39
CCL16-206ENST00000613642 A0A1B0GTH6 734 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 A0A1B0GUA9 196 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 SGTAO43765 313 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 MYCLP1P12525 358 aaPredicted RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 INPP5BP32019 993 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 MCM4P33991 863 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 PAPOLAP51003 745 aaKnown RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 USP11P51784 963 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 NEK2P51955 445 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 TAF11Q15544 211 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 CPLX2Q6PUV4 134 aaKnown RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 SYT10Q6XYQ8 523 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 GBP6Q6ZN66 633 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 C1orf229Q6ZS94 237 aaPredicted RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 ERC1Q8IUD2 1116 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 MAML1Q92585 1016 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 KLRG1Q96E93 195 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 ZSCAN10Q96SZ4 725 aaPredicted RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 TAOK3Q9H2K8 898 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 CD248Q9HCU0 757 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 LUC7LQ9NQ29 371 aaKnown RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 PRR12Q9ULL5 1215 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 RRP15Q9Y3B9 282 aaKnown RBP6.34□□□□□ -1.39
CCL16-206ENST00000613642 IVNS1ABPQ9Y6Y0 642 aa6.34□□□□□ -1.39
CCL16-206ENST00000613642 ATAD2BQ9ULI0 1458 aa6.34□□□□□ -1.4
CCL16-206ENST00000613642 PTPRGP23470 1445 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 LAMC3Q9Y6N6 1575 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 ZBED4O75132 1171 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 TBCAO75347 108 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 STAM2O75886 525 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 RTN3O95197 1032 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 FGAP02671 866 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 RBP3P10745 1247 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 PHKA2P46019 1235 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 MRPL12P52815 198 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 SNRPNP63162 240 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 TPM4P67936 248 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 ADCY1Q08828 1119 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 G3BP1Q13283 466 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCL16-206ENST00000613642 ARHGEF6Q15052 776 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 LONRF1Q17RB8 773 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 RRP12Q5JTH9 1297 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 SPDYCQ5MJ68 293 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 AKNAD1Q5T1N1 836 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 ARMC9Q7Z3E5 817 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 PROSER2Q86WR7 435 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 RNF168Q8IYW5 571 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 ARL10Q8N8L6 244 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 GBP7Q8N8V2 638 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 GALNT6Q8NCL4 622 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 KIF18AQ8NI77 898 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 USP6NLQ92738 828 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 N4BP2L2Q92802 583 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 EXOC4Q96A65 974 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 LRRC45Q96CN5 670 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 PDLIM2Q96JY6 352 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 RUFY1Q96T51 708 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 THUMPD2Q9BTF0 503 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 VCX3BQ9H321 246 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 MMADHCQ9H3L0 296 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 PANK3Q9H999 370 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 GPAMQ9HCL2 828 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 IFT57Q9NWB7 429 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 GDF2Q9UK05 429 aaPredicted RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 ASAP1Q9ULH1 1129 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 PHF24Q9UPV7 400 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 LUC7L2Q9Y383 392 aaKnown RBP6.33□□□□□ -1.4
CCL16-206ENST00000613642 PDS5BQ9NTI5 1447 aa6.33□□□□□ -1.4
CCL16-206ENST00000613642 ROCK1Q13464 1354 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms