RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TAOK2Q9UL54 1235 aa19.84■□□□□ 0.77
IRF1-211ENST00000613424 ZHX2Q9Y6X8 837 aa19.84■□□□□ 0.77
IRF1-211ENST00000613424 MANSC4A6NHS7 340 aaPredicted RBP19.83■□□□□ 0.77
IRF1-211ENST00000613424 FGAP02671 866 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 TM4SF4P48230 202 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 CDK8P49336 464 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 CCDC84Q86UT8 332 aaPredicted RBP19.83■□□□□ 0.77
IRF1-211ENST00000613424 RUFY2Q8WXA3 655 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 MS4A4AQ96JQ5 239 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 WBP1LQ9NX94 342 aa19.83■□□□□ 0.77
IRF1-211ENST00000613424 DOCK1Q14185 1865 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 ASNSP08243 561 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 GTF2A2P52657 109 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 INHBEP58166 350 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 STK11IPQ8N1F8 1099 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 GINM1Q9NU53 330 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 AFG3L2Q9Y4W6 797 aa19.82■□□□□ 0.76
IRF1-211ENST00000613424 USP17L5A8MUK1 530 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 GH2P01242 217 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 PPARAQ07869 468 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 SREBF2Q12772 1141 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 ABCB5Q2M3G0 1257 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 ZBTB21Q9ULJ3 1066 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 KCNH4Q9UQ05 1017 aa19.81■□□□□ 0.76
IRF1-211ENST00000613424 TESPA1A2RU30 521 aaPredicted RBP19.8■□□□□ 0.76
IRF1-211ENST00000613424 CXCL11O14625 94 aa19.8■□□□□ 0.76
IRF1-211ENST00000613424 SNAPC2Q13487 334 aa19.8■□□□□ 0.76
IRF1-211ENST00000613424 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
IRF1-211ENST00000613424 ATAD5Q96QE3 1844 aa19.8■□□□□ 0.76
IRF1-211ENST00000613424 ROBO3Q96MS0 1386 aa19.8■□□□□ 0.76
IRF1-211ENST00000613424 RAD50Q92878 1312 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 SGSM2O43147 1006 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 BRI3BPQ8WY22 251 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 PTPN18Q99952 460 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 DSCC1Q9BVC3 393 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 TBC1D2Q9BYX2 928 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 MKNK2Q9HBH9 465 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 PHIPQ8WWQ0 1821 aa19.79■□□□□ 0.76
IRF1-211ENST00000613424 ZMYM6O95789 1325 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 CCL15-CCL14A0A0B4J2E2 113 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 TRIM75PA6NK02 468 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
IRF1-211ENST00000613424 SLC3A2P08195 630 aaKnown RBP19.78■□□□□ 0.76
IRF1-211ENST00000613424 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
IRF1-211ENST00000613424 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
IRF1-211ENST00000613424 CETPP11597 493 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 AKR1B1P15121 316 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 CTDSPL2Q05D32 466 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 SPP2Q13103 211 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 RAB3GAP1Q15042 981 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 CCL15Q16663 113 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 ZNF280CQ8ND82 737 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 CCDC17Q96LX7 622 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 BEGAINQ9BUH8 593 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 WDR18Q9BV38 432 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 ANAPC4Q9UJX5 808 aa19.78■□□□□ 0.76
IRF1-211ENST00000613424 IGF2BP3O00425 579 aaKnown RBP eCLIP19.77■□□□□ 0.76
IRF1-211ENST00000613424 GUCY1A2P33402 732 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 IFNL1Q8IU54 200 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 AS3MTQ9HBK9 375 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 ZNF287Q9HBT7 754 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 RNF186Q9NXI6 227 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 LAMB1P07942 1786 aa19.77■□□□□ 0.76
IRF1-211ENST00000613424 A0A0G2JLL6 359 aaPredicted RBP19.76■□□□□ 0.75
IRF1-211ENST00000613424 PRDM1O75626 825 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 RASA1P20936 1047 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 PDE4BQ07343 736 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 MOGSQ13724 837 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 SEPT2Q15019 361 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 PRRT2Q7Z6L0 340 aaPredicted RBP19.76■□□□□ 0.75
IRF1-211ENST00000613424 ESYT1Q9BSJ8 1104 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 INCENPQ9NQS7 918 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 TACC3Q9Y6A5 838 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 MYH8P13535 1937 aa19.76■□□□□ 0.75
IRF1-211ENST00000613424 CDC45O75419 566 aa19.75■□□□□ 0.75
IRF1-211ENST00000613424 TRPA1O75762 1119 aa19.75■□□□□ 0.75
IRF1-211ENST00000613424 HAND2P61296 217 aa19.75■□□□□ 0.75
IRF1-211ENST00000613424 PTH1RQ03431 593 aa19.75■□□□□ 0.75
IRF1-211ENST00000613424 TMEM179Q6ZVK1 233 aa19.75■□□□□ 0.75
IRF1-211ENST00000613424 ZNF444Q8N0Y2 327 aaPredicted RBP19.75■□□□□ 0.75
IRF1-211ENST00000613424 BTBD19C9JJ37 291 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 ZNF213O14771 459 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 BACE1P56817 501 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 OTUD7BQ6GQQ9 843 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 FASTKD5Q7L8L6 764 aaKnown RBP19.74■□□□□ 0.75
IRF1-211ENST00000613424 FAM43AQ8N2R8 423 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 CTNNA3Q9UI47 895 aa19.74■□□□□ 0.75
IRF1-211ENST00000613424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
IRF1-211ENST00000613424 USP17L10C9JJH3 530 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 FOXN1O15353 648 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 CA12O43570 354 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 ALDH1A1P00352 501 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 FGRP09769 529 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 SH3D19Q5HYK7 790 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 GPAT2Q6NUI2 795 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 CASC1Q6TDU7 716 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 GADL1Q6ZQY3 521 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.73■□□□□ 0.75
IRF1-211ENST00000613424 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
IRF1-211ENST00000613424 C19orf81C9J6K1 198 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms