RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ORAI2Q96SN7 254 aa12.25□□□□□ -0.45
CDC42EP3-206ENST00000611976 TCIRG1Q13488 830 aa12.25□□□□□ -0.45
CDC42EP3-206ENST00000611976 IFT81Q8WYA0 676 aa12.25□□□□□ -0.45
CDC42EP3-206ENST00000611976 GOLGA6CA6NDK9 693 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 GOLGA6DP0CG33 693 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 FMNL3Q8IVF7 1028 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 ANKS4BQ8N8V4 417 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 GOLGA6AQ9NYA3 693 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 C6orf229H3BNL8 230 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 DPCR1Q3MIW9 517 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 VWA3BQ502W6 1294 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 LINC00301Q8NCQ3 95 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 RABGGTAQ92696 567 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 SETDB2Q96T68 719 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 PLIN2Q99541 437 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 SLF1Q9BQI6 1058 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 GPATCH11Q8N954 259 aa12.24□□□□□ -0.45
CDC42EP3-206ENST00000611976 ZEB2O60315 1214 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 ARID5AQ03989 594 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 DNAJC21Q5F1R6 531 aaKnown RBP12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 GOLGA6BA6NDN3 693 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 SPATA1Q5VX52 437 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 TSKSQ9UJT2 592 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 TNNI2P48788 182 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 ZSCAN26Q16670 478 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 LETM2Q2VYF4 491 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 NOX5Q96PH1 765 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 MAST3O60307 1309 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 NF2P35240 595 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 CCDC65Q8IXS2 484 aa12.23□□□□□ -0.45
CDC42EP3-206ENST00000611976 SASH1O94885 1247 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 LDHBP07195 334 aaKnown RBP12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 KRT13P13646 458 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 IBSPP21815 317 aaPredicted RBP12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 DDIT3P35638 169 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 DHX37Q8IY37 1157 aaKnown RBP12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 MAPK8IP1Q9UQF2 711 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 PPFIA1Q13136 1202 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 UBE3CQ15386 1083 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 NBPF14Q5TI25 921 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 DESI2Q9BSY9 194 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 PPARAQ07869 468 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 RFX7Q2KHR2 1363 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 PDE6AP16499 860 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 OR8K1Q8NGG5 319 aa12.22□□□□□ -0.45
CDC42EP3-206ENST00000611976 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 PCCAP05165 728 aaPredicted RBP12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 CTSWP56202 376 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 PLA2G4DQ86XP0 818 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 CLIC6Q96NY7 704 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 PCDHA5Q9Y5H7 936 aa12.21□□□□□ -0.45
CDC42EP3-206ENST00000611976 TRAF5O00463 557 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 MORC3Q14149 939 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 FANCBQ8NB91 859 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 CCDC26Q8TAB7 109 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 ATG3Q9NT62 314 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 KIF4AO95239 1232 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 USP37Q86T82 979 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 MED4Q9NPJ6 270 aa12.21□□□□□ -0.46
CDC42EP3-206ENST00000611976 NDUFAB1O14561 156 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 ATP2C2O75185 946 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 SRGAP1Q7Z6B7 1085 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 CPLX4Q7Z7G2 160 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 ZBTB38Q8NAP3 1195 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 NUCKS1Q9H1E3 243 aaKnown RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 BLZF1Q9H2G9 400 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 MYO1AQ9UBC5 1043 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms