RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 HMGB2P26583 209 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 RCAN1P53805 252 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 AMPD3Q01432 767 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 IGSF22Q8N9C0 903 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 CELF1Q92879 486 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 FEZ1Q99689 392 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 ZHX3Q9H4I2 956 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 SCG2P13521 617 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 DYNLL1P63167 89 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 DTHD1Q6ZMT9 781 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 CNGA4Q8IV77 575 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 PNMA1Q8ND90 353 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 BSDC1Q9NW68 430 aaPredicted RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 PNPLA7Q6ZV29 1317 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 MTIF2P46199 727 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 NAP1L1P55209 391 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 ASIC1P78348 528 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 CCDC96Q2M329 555 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 ERFEQ4G0M1 354 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 FKBP15Q5T1M5 1219 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 MAPKAPK5Q8IW41 473 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 CAGE1Q8TC20 777 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 ZC3H12CQ9C0D7 883 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 DEF6Q9H4E7 631 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 UFL1O94874 794 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 CDC25BP30305 580 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 SMAP1Q8IYB5 467 aaPredicted RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 CALML4Q96GE6 196 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 GSDMAQ96QA5 445 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 BRIP1Q9BX63 1249 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 ACBD3Q9H3P7 528 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 LY9Q9HBG7 655 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 PCDHB6Q9Y5E3 794 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.23□□□□□ -1.252e-8■■■■■ 31.6
SNX13-213ENST00000611725 ZNF804BA4D1E1 1349 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 UBN2Q6ZU65 1347 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 TRIM21P19474 475 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 RBM5P52756 815 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNX13-213ENST00000611725 BMS1Q14692 1282 aaKnown RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 ZNF397Q8NF99 534 aaPredicted RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 STAG1Q8WVM7 1258 aa7.23□□□□□ -1.25
SNX13-213ENST00000611725 EPB41L4AQ9HCS5 686 aaPredicted RBP7.23□□□□□ -1.25
SNX13-213ENST00000611725 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 PLA2G4DQ86XP0 818 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 KRT222Q8N1A0 295 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 KCNQ2O43526 872 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 DDAH1O94760 285 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 PRDX5P30044 214 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 LZTFL1Q9NQ48 299 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 LETM2Q2VYF4 491 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 MARCH10Q8NA82 808 aaPredicted RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 IGDCC4Q8TDY8 1250 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 SENP2Q9HC62 589 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 LUC7L2Q9Y383 392 aaKnown RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 STK36Q9NRP7 1315 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 CAMTA2O94983 1202 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 TRAPPC10P48553 1259 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 TMX1Q9H3N1 280 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 AKR1B15C9JRZ8 316 aaPredicted RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 AKR1B10O60218 316 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 WDHD1O75717 1129 aaPredicted RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 U2AF2P26368 475 aaKnown RBP eCLIP7.22□□□□□ -1.254e-6■■■■■ 30.3
SNX13-213ENST00000611725 TNNI2P48788 182 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 PLCD1P51178 756 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 PTGDRQ13258 359 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 NONOQ15233 471 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNX13-213ENST00000611725 DGKHQ86XP1 1220 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.22□□□□□ -1.25
SNX13-213ENST00000611725 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
SNX13-213ENST00000611725 F8W031 263 aaPredicted RBP7.21□□□□□ -1.25
SNX13-213ENST00000611725 AP5Z1O43299 807 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 CASQ1P31415 396 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 SHC4Q6S5L8 630 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 FBXL16Q8N461 479 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 PLIN2Q99541 437 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 CSRNP2Q9H175 543 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 LUC7LQ9NQ29 371 aaKnown RBP7.21□□□□□ -1.25
SNX13-213ENST00000611725 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.25
SNX13-213ENST00000611725 PRPF3O43395 683 aaKnown RBP7.21□□□□□ -1.25
SNX13-213ENST00000611725 HLA-DOAP06340 250 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 ST5P78524 1137 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 PICALMQ13492 652 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 DIXDC1Q155Q3 683 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 OSBPL5Q9H0X9 879 aaPredicted RBP7.21□□□□□ -1.25
SNX13-213ENST00000611725 MINPP1Q9UNW1 487 aa7.21□□□□□ -1.25
SNX13-213ENST00000611725 KIF20AO95235 890 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 KRT79Q5XKE5 535 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 WWC2Q6AWC2 1192 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 CERS3Q8IU89 383 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 FAM84BQ96KN1 310 aaPredicted RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 KCNF1Q9H3M0 494 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 SRP68Q9UHB9 627 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 SYNRGQ9UMZ2 1314 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 MPHOSPH10O00566 681 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 KRT9P35527 623 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 EPS15P42566 896 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms