RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	SLC4A8	Q2Y0W8	1093 aa		13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	CCDC129	Q6ZRS4	1044 aa		13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	ARHGAP39	Q9C0H5	1083 aa		13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZCCHC17	Q9NP64	241 aa	Known RBP	13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	EN2	P19622	333 aa	Predicted RBP	13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	LACTB	P83111	547 aa	Predicted RBP	13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	PPAT	Q06203	517 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	ARHGEF6	Q15052	776 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	SLC9C1	Q4G0N8	1177 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	BMP2KL	Q5H9B9	411 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	TICAM2	Q86XR7	235 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZNF333	Q96JL9	665 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	STRBP	Q96SI9	672 aa	Known RBP	13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	SLC4A4	Q9Y6R1	1079 aa		13.41	□□□□□ -0.26
FGFR2-223	ENST00000611527	HIP1	O00291	1037 aa		13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	ECM2	O94769	699 aa	Predicted RBP	13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	HELLS	Q9NRZ9	838 aa		13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZNF112	Q9UJU3	913 aa		13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	PALD1	Q9ULE6	856 aa		13.4	□□□□□ -0.26
FGFR2-223	ENST00000611527	CCDC171	Q6TFL3	1326 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	FAM196B	A6NMK8	535 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	MYC	P01106	439 aa	Predicted RBP	13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	HLA-DOA	P06340	250 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	SLURP2	P0DP57	97 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	KIF22	Q14807	665 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	NOL9	Q5SY16	702 aa	Known RBP	13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	CWC27	Q6UX04	472 aa	Known RBP	13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	SH3TC2	Q8TF17	1288 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	TMEM106C	Q9BVX2	250 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	ATP8A2	Q9NTI2	1148 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	CPA4	Q9UI42	421 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	KCNH4	Q9UQ05	1017 aa		13.39	□□□□□ -0.27
FGFR2-223	ENST00000611527	PDHX	O00330	501 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	CYP2D6	P10635	497 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	GNAT2	P19087	354 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	EVX2	Q03828	476 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	MOGS	Q13724	837 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	MCMDC2	Q4G0Z9	681 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	ANKRD23	Q86SG2	305 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	NBPF11	Q86T75	865 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	DDRGK1	Q96HY6	314 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	DHX36	Q9H2U1	1008 aa	Known RBP	13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	MCM9	Q9NXL9	1143 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	RAD50	Q92878	1312 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	ADGRA2	Q96PE1	1338 aa		13.38	□□□□□ -0.27
FGFR2-223	ENST00000611527	PTPRF	P10586	1907 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	PHIP	Q8WWQ0	1821 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	GSG1L2	A8MUP6	293 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	FOXP2	O15409	715 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	POLR3D	P05423	398 aa	Predicted RBP	13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	CHML	P26374	656 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	CTGF	P29279	349 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	TDO2	P48775	406 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	VPS53	Q5VIR6	699 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	C17orf99	Q6UX52	265 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	IL25	Q9H293	177 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	DNAJC18	Q9H819	358 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	PI4KB	Q9UBF8	816 aa		13.37	□□□□□ -0.27
FGFR2-223	ENST00000611527	MGAM	O43451	1857 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	CYP2D7	A0A087X1C5	515 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	PHF20L1	A8MW92	1017 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	APP	P05067	770 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	GIMAP6	Q6P9H5	292 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	AMOTL1	Q8IY63	956 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	TRIM47	Q96LD4	638 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	TRIM34	Q9BYJ4	488 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	EHD4	Q9H223	541 aa		13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	HERC5	Q9UII4	1024 aa	Known RBP	13.36	□□□□□ -0.27
FGFR2-223	ENST00000611527	ROBO3	Q96MS0	1386 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	USP17L12	C9JPN9	530 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	USP17L21	D6R901	530 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	GNRH1	P01148	92 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	PSMC4	P43686	418 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	PLCD1	P51178	756 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	MFAP1	P55081	439 aa	Known RBP	13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	GPAT2	Q6NUI2	795 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	TTC6	Q86TZ1	520 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	SCYL3	Q8IZE3	742 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	NACAP1	Q9BZK3	213 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	NAPB	Q9H115	298 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	PICK1	Q9NRD5	415 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	SERPINB13	Q9UIV8	391 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	GTF3C3	Q9Y5Q9	886 aa		13.35	□□□□□ -0.27
FGFR2-223	ENST00000611527	PATL2	C9JE40	543 aa	Known RBP	13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	SMIM22	K7EJ46	135 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	CXCL11	O14625	94 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	TBC1D12	O60347	775 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	CDC45	O75419	566 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	CYP2C8	P10632	490 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	PTPRA	P18433	802 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	OSBP	P22059	807 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	PRMT2	P55345	433 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	MAP3K10	Q02779	954 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	C12orf60	Q5U649	245 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms