RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 JAG1P78504 1218 aa29.82■■■□□ 2.36
CDKN3-211ENST00000611205 ALPK3Q96L96 1907 aa29.81■■■□□ 2.36
CDKN3-211ENST00000611205 HLA-DOAP06340 250 aa29.81■■■□□ 2.36
CDKN3-211ENST00000611205 DYNLL1P63167 89 aaKnown RBP29.81■■■□□ 2.36
CDKN3-211ENST00000611205 HNRNPUQ00839 825 aaKnown RBP eCLIP29.81■■■□□ 2.36
CDKN3-211ENST00000611205 SHROOM1Q2M3G4 852 aaPredicted RBP29.81■■■□□ 2.36
CDKN3-211ENST00000611205 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.81■■■□□ 2.36
CDKN3-211ENST00000611205 NOP58Q9Y2X3 529 aaKnown RBP29.81■■■□□ 2.36
CDKN3-211ENST00000611205 CYP7A1P22680 504 aa29.8■■■□□ 2.36
CDKN3-211ENST00000611205 IDH1O75874 414 aaKnown RBP29.79■■■□□ 2.36
CDKN3-211ENST00000611205 HMGCRP04035 888 aa29.79■■■□□ 2.36
CDKN3-211ENST00000611205 RLBP1P12271 317 aa29.79■■■□□ 2.36
CDKN3-211ENST00000611205 CAPN2P17655 700 aa29.79■■■□□ 2.36
CDKN3-211ENST00000611205 METTL16Q86W50 562 aaKnown RBP29.79■■■□□ 2.36
CDKN3-211ENST00000611205 EAF2Q96CJ1 260 aaPredicted RBP29.79■■■□□ 2.36
CDKN3-211ENST00000611205 ZBTB21Q9ULJ3 1066 aa29.79■■■□□ 2.36
CDKN3-211ENST00000611205 C19orf81C9J6K1 198 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 USP17L10C9JJH3 530 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 ZBTB7BO15156 539 aaPredicted RBP29.78■■■□□ 2.36
CDKN3-211ENST00000611205 EVI5O60447 810 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 IGSF3O75054 1194 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 P2RX7Q99572 595 aaKnown RBP29.78■■■□□ 2.36
CDKN3-211ENST00000611205 MORF4L1Q9UBU8 362 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 GJD2Q9UKL4 321 aa29.78■■■□□ 2.36
CDKN3-211ENST00000611205 PEX10O60683 326 aa29.77■■■□□ 2.36
CDKN3-211ENST00000611205 HOXA7P31268 230 aaPredicted RBP29.77■■■□□ 2.36
CDKN3-211ENST00000611205 MIGA1Q8NAN2 632 aa29.77■■■□□ 2.36
CDKN3-211ENST00000611205 PAWRQ96IZ0 340 aaKnown RBP29.77■■■□□ 2.36
CDKN3-211ENST00000611205 CRISPLD2Q9H0B8 497 aa29.77■■■□□ 2.36
CDKN3-211ENST00000611205 GINM1Q9NU53 330 aa29.77■■■□□ 2.36
CDKN3-211ENST00000611205 NDUFB9Q9Y6M9 179 aa29.77■■■□□ 2.36
CDKN3-211ENST00000611205 USP5P45974 858 aa29.76■■■□□ 2.35
CDKN3-211ENST00000611205 HERVK_113P62684 666 aa29.76■■■□□ 2.35
CDKN3-211ENST00000611205 TRIM32Q13049 653 aa29.76■■■□□ 2.35
CDKN3-211ENST00000611205 CYP2B6P20813 491 aa29.75■■■□□ 2.35
CDKN3-211ENST00000611205 MAGEB6Q8N7X4 407 aa29.75■■■□□ 2.35
CDKN3-211ENST00000611205 DIS3LQ8TF46 1054 aaKnown RBP29.75■■■□□ 2.35
CDKN3-211ENST00000611205 TXNRD2Q9NNW7 524 aa29.75■■■□□ 2.35
CDKN3-211ENST00000611205 HMX1Q9NP08 348 aaPredicted RBP29.75■■■□□ 2.35
CDKN3-211ENST00000611205 GPRC5AQ8NFJ5 357 aa29.74■■■□□ 2.35
CDKN3-211ENST00000611205 RPTORQ8N122 1335 aa29.73■■■□□ 2.35
CDKN3-211ENST00000611205 NECAB2Q7Z6G3 386 aa29.73■■■□□ 2.35
CDKN3-211ENST00000611205 TRIB2Q92519 343 aa29.73■■■□□ 2.35
CDKN3-211ENST00000611205 EXOC6BQ9Y2D4 811 aa29.73■■■□□ 2.35
CDKN3-211ENST00000611205 DDX60LQ5H9U9 1706 aaKnown RBP29.73■■■□□ 2.35
CDKN3-211ENST00000611205 GH2P01242 217 aa29.72■■■□□ 2.35
CDKN3-211ENST00000611205 CEP85Q6P2H3 762 aa29.72■■■□□ 2.35
CDKN3-211ENST00000611205 PAGR1Q9BTK6 254 aa29.72■■■□□ 2.35
CDKN3-211ENST00000611205 ANTXR1Q9H6X2 564 aa29.72■■■□□ 2.35
CDKN3-211ENST00000611205 USP17L2Q6R6M4 530 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 AACSQ86V21 672 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 CERS3Q8IU89 383 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 CCAR1Q8IX12 1150 aaKnown RBP29.71■■■□□ 2.35
CDKN3-211ENST00000611205 NUDT12Q9BQG2 462 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 PRO3102Q9H379 93 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 EMILIN3Q9NT22 766 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 RBPJLQ9UBG7 517 aa29.71■■■□□ 2.35
CDKN3-211ENST00000611205 MAP3K12Q12852 859 aa29.7■■■□□ 2.35
CDKN3-211ENST00000611205 ZYXQ15942 572 aaKnown RBP29.7■■■□□ 2.35
CDKN3-211ENST00000611205 ANKLE1Q8NAG6 615 aa29.7■■■□□ 2.35
CDKN3-211ENST00000611205 FEZ1Q99689 392 aa29.7■■■□□ 2.35
CDKN3-211ENST00000611205 NAV1Q8NEY1 1877 aa29.7■■■□□ 2.34
CDKN3-211ENST00000611205 ERVK-9P63128 1117 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 ERVK-24P63145 666 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 PDE3AQ14432 1141 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 Q3C1V9 767 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 ERC1Q8IUD2 1116 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 SOCS4Q8WXH5 440 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 SERPINB13Q9UIV8 391 aa29.69■■■□□ 2.34
CDKN3-211ENST00000611205 MAPK4P31152 587 aa29.68■■■□□ 2.34
CDKN3-211ENST00000611205 GTF3C2Q8WUA4 911 aaPredicted RBP29.68■■■□□ 2.34
CDKN3-211ENST00000611205 PRKAR2AP13861 404 aaKnown RBP29.67■■■□□ 2.34
CDKN3-211ENST00000611205 RAB3GAP1Q15042 981 aa29.67■■■□□ 2.34
CDKN3-211ENST00000611205 TATDN1Q6P1N9 297 aa29.67■■■□□ 2.34
CDKN3-211ENST00000611205 TTC6Q86TZ1 520 aa29.67■■■□□ 2.34
CDKN3-211ENST00000611205 PORCNQ9H237 461 aa29.67■■■□□ 2.34
CDKN3-211ENST00000611205 C7orf61Q8IZ16 206 aa29.66■■■□□ 2.34
CDKN3-211ENST00000611205 PANK1Q8TE04 598 aa29.66■■■□□ 2.34
CDKN3-211ENST00000611205 NBPF3Q9H094 633 aa29.66■■■□□ 2.34
CDKN3-211ENST00000611205 EHD4Q9H223 541 aa29.66■■■□□ 2.34
CDKN3-211ENST00000611205 CWC22Q9HCG8 908 aaKnown RBP29.66■■■□□ 2.34
CDKN3-211ENST00000611205 IL1RAPL2Q9NP60 686 aa29.66■■■□□ 2.34
CDKN3-211ENST00000611205 ZKSCAN1P17029 563 aaPredicted RBP29.65■■■□□ 2.34
CDKN3-211ENST00000611205 CERKLQ49MI3 558 aaPredicted RBP29.65■■■□□ 2.34
CDKN3-211ENST00000611205 GPR142Q7Z601 462 aa29.65■■■□□ 2.34
CDKN3-211ENST00000611205 MIER1Q8N108 512 aa29.65■■■□□ 2.34
CDKN3-211ENST00000611205 STAP2Q9UGK3 403 aa29.65■■■□□ 2.34
CDKN3-211ENST00000611205 XRCC5P13010 732 aaKnown RBP29.64■■■□□ 2.34
CDKN3-211ENST00000611205 ABCB5Q2M3G0 1257 aa29.64■■■□□ 2.34
CDKN3-211ENST00000611205 C12orf42Q96LP6 360 aa29.64■■■□□ 2.34
CDKN3-211ENST00000611205 RGS2P41220 211 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 MAP3K21Q5TCX8 1036 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 POTEEQ6S8J3 1075 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 PLEKHH3Q7Z736 793 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 TRMT44Q8IYL2 757 aaKnown RBP29.63■■■□□ 2.33
CDKN3-211ENST00000611205 C11orf49Q9H6J7 331 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 CABP5Q9NP86 173 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 OGDHLQ9ULD0 1010 aa29.63■■■□□ 2.33
CDKN3-211ENST00000611205 USP17L15C9J2P7 530 aa29.62■■■□□ 2.33
CDKN3-211ENST00000611205 USP17L13C9JLJ4 530 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms