RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 NAA16Q6N069 864 aaPredicted RBP21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 PI16Q6UXB8 463 aa21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 SH3RF3Q8TEJ3 882 aaPredicted RBP21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 ZNF384Q8TF68 577 aa21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 MTMR10Q9NXD2 777 aa21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 CT47B1P0C2W7 299 aaPredicted RBP21.32■■□□□ 1
CHMP4A-211ENST00000609024 MDM2Q00987 491 aaPredicted RBP21.32■■□□□ 1
CHMP4A-211ENST00000609024 CACNB2Q08289 660 aaPredicted RBP21.32■■□□□ 1
CHMP4A-211ENST00000609024 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
CHMP4A-211ENST00000609024 RRP1BQ14684 758 aaKnown RBP21.32■■□□□ 1
CHMP4A-211ENST00000609024 ATF7IPQ6VMQ6 1270 aa21.32■■□□□ 1
CHMP4A-211ENST00000609024 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
CHMP4A-211ENST00000609024 GINM1Q9NU53 330 aa21.32■■□□□ 1
CHMP4A-211ENST00000609024 AATFQ9NY61 560 aaKnown RBP eCLIP21.32■■□□□ 1
CHMP4A-211ENST00000609024 PFASO15067 1338 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 HLA-DOAP06340 250 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 ERVK-9P63128 1117 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 ERVK-24P63145 666 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 PLEKHH3Q7Z736 793 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 TGFBRAP1Q8WUH2 860 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 APBA2Q99767 749 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 TXNRD2Q9NNW7 524 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 PRKAG2Q9UGJ0 569 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 LAMA3Q16787 3333 aa21.31■■□□□ 1
CHMP4A-211ENST00000609024 ARID4AP29374 1257 aaPredicted RBP21.3■■□□□ 1
CHMP4A-211ENST00000609024 CCNA1P78396 465 aa21.3■■□□□ 1
CHMP4A-211ENST00000609024 WDR78Q5VTH9 848 aa21.3■■□□□ 1
CHMP4A-211ENST00000609024 GPR142Q7Z601 462 aa21.3■■□□□ 1
CHMP4A-211ENST00000609024 MAPKAPK5Q8IW41 473 aa21.3■■□□□ 1
CHMP4A-211ENST00000609024 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
CHMP4A-211ENST00000609024 GDF11O95390 407 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 CCND3P30281 292 aaPredicted RBP21.29■■□□□ 1
CHMP4A-211ENST00000609024 TTC39AQ5SRH9 613 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 MFSD14CQ5VZR4 134 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 USP17L2Q6R6M4 530 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 FEZ1Q99689 392 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 RBPJLQ9UBG7 517 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 PLXNB2O15031 1838 aa21.29■■□□□ 1
CHMP4A-211ENST00000609024 CUL9Q8IWT3 2517 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 A0A0C4DFX4 3053 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 PEX10O60683 326 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 COL6A1P12109 1028 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 MCAMP43121 646 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 LRRC26Q2I0M4 334 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 CCDC158Q5M9N0 1113 aa21.28■■□□□ 1
CHMP4A-211ENST00000609024 SENP6Q9GZR1 1112 aaPredicted RBP21.28■■□□□ 1
CHMP4A-211ENST00000609024 CNGA1P29973 690 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 MTX1Q13505 466 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 CCL14Q16627 93 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 EDC3Q96F86 508 aaKnown RBP21.27■■□□□ 1
CHMP4A-211ENST00000609024 PORCNQ9H237 461 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 PALD1Q9ULE6 856 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 ZBTB21Q9ULJ3 1066 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 IVNS1ABPQ9Y6Y0 642 aa21.27■■□□□ 1
CHMP4A-211ENST00000609024 FLT1P17948 1338 aa21.27■□□□□ 0.99
CHMP4A-211ENST00000609024 MAP2K5Q13163 448 aa21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 Q3C1V9 767 aa21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 MORN1Q5T089 497 aa21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 SAP30BPQ9UHR5 308 aaKnown RBP21.26■□□□□ 0.99
CHMP4A-211ENST00000609024 MSCO60682 206 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 GNAI2P04899 355 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 ATP2B2Q01814 1243 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 LHX8Q68G74 356 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 USP6NLQ92738 828 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 RABGAP1Q9Y3P9 1069 aa21.25■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L15C9J2P7 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L13C9JLJ4 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L11C9JVI0 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L18D6R9N7 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L22D6RA61 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L17D6RBQ6 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L19D6RCP7 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L20D6RJB6 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 PPP4CP60510 307 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 USP17L24Q0WX57 530 aa21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 ZYXQ15942 572 aaKnown RBP21.24■□□□□ 0.99
CHMP4A-211ENST00000609024 ATN1P54259 1190 aaPredicted RBP21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 USP14P54578 494 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 FAM109BQ6ICB4 259 aaPredicted RBP21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 FAM161BQ96MY7 647 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 EMILIN3Q9NT22 766 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 DDX20Q9UHI6 824 aaKnown RBP21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 NDUFB9Q9Y6M9 179 aa21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.23■□□□□ 0.99
CHMP4A-211ENST00000609024 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 GH2P01242 217 aa21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 USP5P45974 858 aa21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 JAG1P78504 1218 aa21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 COL25A1Q9BXS0 654 aaPredicted RBP21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 DNAJC18Q9H819 358 aa21.22■□□□□ 0.99
CHMP4A-211ENST00000609024 SLC15A5A6NIM6 579 aa21.21■□□□□ 0.99
CHMP4A-211ENST00000609024 IGSF3O75054 1194 aa21.21■□□□□ 0.99
CHMP4A-211ENST00000609024 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms